SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: Viral RNA polymerase

  1. Root: SCOPe 2.06
  2. 2217451Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)
  3. 2220074Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2220075Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2220913Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 protein domains)
  6. 2220921Protein Viral RNA polymerase [56695] (18 species)

Species:

  1. 2220922Avian infectious bursal disease virus [TaxId:10995] [160955] (1 PDB entry)
    Uniprot Q9Q6Q5 31-804
  2. 2220924Bovine viral diarrhea virus [TaxId:11099] [103401] (3 PDB entries)
    1. Domain for 1s48:
    2. Domain for 1s49:
    3. Domains for 1s4f:
      1. 2220927Domain d1s4fa_: 1s4f A: [98495]
      2. 2220928Domain d1s4fb_: 1s4f B: [98496]
      3. 2220929Domain d1s4fc_: 1s4f C: [98497]
      4. 2220930Domain d1s4fd_: 1s4f D: [98498]
  3. 2220931Foot-and-mouth disease virus - type c [TaxId:12116] [187085] (9 PDB entries)
    1. Domain for 2f8e:
    2. Domain for 3klv:
    3. Domain for 3kmq:
    4. Domain for 3kms:
    5. Domain for 3kna:
    6. Domain for 3koa:
    7. Domain for 3nky:
    8. Domain for 3nl0:
    9. Domain for 3nma:
  4. 2220941Foot-and-mouth disease virus [TaxId:12110] [111302] (7 PDB entries)
    Uniprot Q9QCE4 1858-2327
    1. Domain for 1u09:
    2. Domain for 1wne:
    3. Domain for 2d7s:
    4. Domain for 2e9r:
    5. Domains for 2e9t:
      1. 2220946Domain d2e9ta2: 2e9t A:1-470 [146733]
        Other proteins in same PDB: d2e9ta3, d2e9td3
        automated match to d1u09a_
        protein/RNA complex; complexed with mg, ppv
      2. 2220947Domain d2e9td2: 2e9t D:1-470 [146734]
        Other proteins in same PDB: d2e9ta3, d2e9td3
        automated match to d1u09a_
        protein/RNA complex; complexed with mg, ppv
    6. Domain for 2e9z:
    7. Domains for 2ec0:
      1. 2220943Domain d2ec0a_: 2ec0 A: [146776]
        automated match to d1u09a_
        protein/RNA complex; complexed with mg, ppv
      2. 2220944Domain d2ec0d_: 2ec0 D: [146777]
        automated match to d1u09a_
        protein/RNA complex; complexed with mg, ppv
  5. 2220951Hepatitis C virus isolate bk [TaxId:11105] [195056] (4 PDB entries)
    1. Domains for 2giq:
      1. 2220952Domain d2giqa1: 2giq A:2-562 [164724]
        Other proteins in same PDB: d2giqa2, d2giqb2
        automated match to d1nb4a_
        complexed with nn2
      2. 2220953Domain d2giqb1: 2giq B:2-562 [164725]
        Other proteins in same PDB: d2giqa2, d2giqb2
        automated match to d1nb4a_
        complexed with nn2
    2. Domains for 2gir:
      1. 2220958Domain d2gira1: 2gir A:2-562 [164726]
        Other proteins in same PDB: d2gira2, d2girb2
        automated match to d1nb4a_
        complexed with nn3
      2. 2220959Domain d2girb1: 2gir B:2-562 [164727]
        Other proteins in same PDB: d2gira2, d2girb2
        automated match to d1nb4a_
        complexed with nn3
    3. Domains for 4eo6:
      1. 2220954Domain d4eo6a1: 4eo6 A:3-562 [201886]
        Other proteins in same PDB: d4eo6a2, d4eo6b2
        automated match to d4eo6b_
        protein/RNA complex; complexed with 0s2
      2. 2220955Domain d4eo6b1: 4eo6 B:3-565 [195057]
        Other proteins in same PDB: d4eo6a2, d4eo6b2
        automated match to d3gnwb_
        protein/RNA complex; complexed with 0s2
    4. Domains for 4eo8:
      1. 2220956Domain d4eo8a1: 4eo8 A:3-562 [220755]
        Other proteins in same PDB: d4eo8a2, d4eo8b2
        automated match to d4eo6b_
        protein/RNA complex; complexed with 0s3
      2. 2220957Domain d4eo8b1: 4eo8 B:3-565 [220756]
        Other proteins in same PDB: d4eo8a2, d4eo8b2
        automated match to d4eo6b_
        protein/RNA complex; complexed with 0s3
  6. 2220960Hepatitis c virus isolate [TaxId:420174] [188905] (22 PDB entries)
    1. Domains for 3gnv:
      1. 2220979Domain d3gnva_: 3gnv A: [176783]
        automated match to d1nb4a_
        protein/RNA complex; complexed with gol, xnz
      2. 2220980Domain d3gnvb_: 3gnv B: [176784]
        automated match to d1nb4a_
        protein/RNA complex; complexed with gol, xnz
    2. Domains for 3gnw:
      1. 2220970Domain d3gnwa_: 3gnw A: [176785]
        Other proteins in same PDB: d3gnwb2
        automated match to d1nb4a_
        protein/RNA complex; complexed with cl, xnc
      2. 2220971Domain d3gnwb1: 3gnw B:1-570 [176786]
        Other proteins in same PDB: d3gnwb2
        automated match to d1nb4a_
        protein/RNA complex; complexed with cl, xnc
    3. Domains for 3gol:
      1. 2220985Domain d3gola_: 3gol A: [176789]
        automated match to d1nb4a_
        complexed with mg, xnd
      2. 2220986Domain d3golb_: 3gol B: [176790]
        automated match to d1nb4a_
        complexed with mg, xnd
    4. Domains for 3ske:
      1. 2220963Domain d3skea_: 3ske A: [196188]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 054, po4
      2. 2220964Domain d3skeb_: 3ske B: [196187]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 054, po4
    5. Domain for 4iz0:
    6. Domains for 4j02:
      1. 2220966Domain d4j02a_: 4j02 A: [223492]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1je, na, so4
      2. 2220967Domain d4j02b_: 4j02 B: [223493]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1je, na, so4
    7. Domain for 4jju:
    8. Domains for 4jtw:
      1. 2221001Domain d4jtwa_: 4jtw A: [253046]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1nu, gol, mg
      2. 2221002Domain d4jtwb_: 4jtw B: [253047]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1nu, gol, mg
    9. Domains for 4jy0:
      1. 2220977Domain d4jy0a_: 4jy0 A: [256822]
        automated match to d3gnwb_
        complexed with 1o9
      2. 2220978Domain d4jy0b_: 4jy0 B: [262783]
        automated match to d3gnwb_
        complexed with 1o9
    10. Domains for 4jy1:
      1. 2220999Domain d4jy1a_: 4jy1 A: [266486]
        automated match to d3gnwb_
        complexed with nn3
      2. 2221000Domain d4jy1b_: 4jy1 B: [266487]
        automated match to d3gnwb_
        complexed with nn3
    11. Domains for 4kai:
      1. 2220981Domain d4kaia_: 4kai A: [197204]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1pv
      2. 2220982Domain d4kaib_: 4kai B: [197111]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1pv
    12. Domains for 4kb7:
      1. 2220968Domain d4kb7a_: 4kb7 A: [224248]
        automated match to d4kbia_
        protein/RNA complex; complexed with 690
      2. 2220969Domain d4kb7b_: 4kb7 B: [224249]
        automated match to d4kbia_
        protein/RNA complex; complexed with 690
    13. Domains for 4kbi:
      1. 2220973Domain d4kbia_: 4kbi A: [197112]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1c0
      2. 2220974Domain d4kbib_: 4kbi B: [197205]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1c0
    14. Domains for 4ke5:
      1. 2220975Domain d4ke5a_: 4ke5 A: [224265]
        automated match to d4kbia_
        protein/RNA complex; complexed with 1pv
      2. 2220976Domain d4ke5b_: 4ke5 B: [224266]
        automated match to d4kbia_
        protein/RNA complex; complexed with 1pv
    15. Domains for 4mia:
      1. 2220997Domain d4miaa1: 4mia A:2-562 [263017]
        Other proteins in same PDB: d4miaa2, d4miab2
        automated match to d3gnwb_
        complexed with 28l, zn
      2. 2220998Domain d4miab1: 4mia B:2-562 [257080]
        Other proteins in same PDB: d4miaa2, d4miab2
        automated match to d3gnwb_
        complexed with 28l, zn
    16. Domains for 4mib:
      1. 2220983Domain d4miba1: 4mib A:2-562 [266735]
        Other proteins in same PDB: d4miba2, d4mibb2
        automated match to d3gnwb_
        complexed with 28m, dms
      2. 2220984Domain d4mibb1: 4mib B:2-562 [266736]
        Other proteins in same PDB: d4miba2, d4mibb2
        automated match to d3gnwb_
        complexed with 28m, dms
    17. Domains for 4mz4:
      1. 2220961Domain d4mz4a_: 4mz4 A: [229706]
        automated match to d3upha_
        protein/RNA complex; complexed with 2f3, po4
      2. 2220962Domain d4mz4b_: 4mz4 B: [229710]
        automated match to d3upha_
        protein/RNA complex; complexed with 2f3, po4
    18. Domains for 4oow:
      1. 2220993Domain d4oowa_: 4oow A: [261849]
        automated match to d3gnwb_
        complexed with caq
      2. 2220994Domain d4oowb_: 4oow B: [261850]
        automated match to d3gnwb_
        complexed with caq
    19. Domains for 4ry4:
      1. 2220989Domain d4ry4a_: 4ry4 A: [309606]
        automated match to d3gnwb_
        mutant
      2. 2220990Domain d4ry4b_: 4ry4 B: [309607]
        automated match to d3gnwb_
        mutant
    20. Domains for 4ry5:
      1. 2220991Domain d4ry5a_: 4ry5 A: [309608]
        automated match to d3gnwb_
        complexed with mn, utp; mutant
      2. 2220992Domain d4ry5b_: 4ry5 B: [309609]
        automated match to d3gnwb_
        complexed with mn, utp; mutant
    21. Domains for 4ry6:
      1. 2220987Domain d4ry6a_: 4ry6 A: [309610]
        automated match to d3gnwb_
        mutant
      2. 2220988Domain d4ry6b_: 4ry6 B: [309611]
        automated match to d3gnwb_
        mutant
    22. Domains for 4ry7:
      1. 2220995Domain d4ry7a_: 4ry7 A: [309612]
        automated match to d3gnwb_
        mutant
      2. 2220996Domain d4ry7b_: 4ry7 B: [309613]
        automated match to d3gnwb_
        mutant
  7. 2221003Hepatitis c virus subtype 1a [TaxId:31646] [189928] (4 PDB entries)
    1. Domain for 3qgh:
    2. Domain for 3qgi:
    3. Domains for 4khm:
      1. 2221005Domain d4khma_: 4khm A: [197116]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1pv, so4
      2. 2221006Domain d4khmb_: 4khm B: [197206]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1pv, so4
    4. Domains for 4khr:
      1. 2221008Domain d4khra_: 4khr A: [197207]
        automated match to d3gnwb_
        protein/RNA complex; complexed with 1pv, so4
      2. 2221009Domain d4khrb_: 4khr B: [202851]
        automated match to d4khra_
        protein/RNA complex; complexed with 1pv, so4
  8. 2221010Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries)
    1. Domains for 1c2p:
      1. 2221050Domain d1c2pa1: 1c2p A:3-563 [43117]
        Other proteins in same PDB: d1c2pa2, d1c2pb2
      2. 2221051Domain d1c2pb1: 1c2p B:3-566 [43118]
        Other proteins in same PDB: d1c2pa2, d1c2pb2
    2. Domains for 1csj:
      1. 2221129Domain d1csja_: 1csj A: [43120]
      2. 2221130Domain d1csjb_: 1csj B: [43121]
    3. Domain for 1gx5:
    4. Domain for 1gx6:
    5. Domains for 1nb4:
      1. 2221064Domain d1nb4a_: 1nb4 A: [85509]
      2. 2221065Domain d1nb4b_: 1nb4 B: [85510]
    6. Domains for 1nb6:
      1. 2221102Domain d1nb6a_: 1nb6 A: [85511]
        protein/RNA complex; complexed with mn, utp
      2. 2221103Domain d1nb6b_: 1nb6 B: [85512]
        protein/RNA complex; complexed with mn, utp
    7. Domains for 1nb7:
      1. 2221139Domain d1nb7a_: 1nb7 A: [85513]
        protein/RNA complex; complexed with mn
      2. 2221140Domain d1nb7b_: 1nb7 B: [85514]
        protein/RNA complex; complexed with mn
    8. Domains for 1nhu:
      1. 2221060Domain d1nhua_: 1nhu A: [85723]
        protein/RNA complex; complexed with 153
      2. 2221061Domain d1nhub_: 1nhu B: [85724]
        protein/RNA complex; complexed with 153
    9. Domains for 1nhv:
      1. 2221135Domain d1nhva_: 1nhv A: [85725]
        protein/RNA complex; complexed with 154
      2. 2221136Domain d1nhvb_: 1nhv B: [85726]
        protein/RNA complex; complexed with 154
    10. Domain for 1os5:
    11. Domain for 1quv:
    12. Domain for 2brk:
    13. Domain for 2brl:
    14. Domains for 2fvc:
      1. 2221052Domain d2fvca_: 2fvc A: [164476]
        automated match to d1nb4a_
        complexed with 888
      2. 2221053Domain d2fvcb_: 2fvc B: [164477]
        automated match to d1nb4a_
        complexed with 888
    15. Domain for 2hai:
    16. Domains for 2qe2:
      1. 2221145Domain d2qe2a_: 2qe2 A: [167555]
        automated match to d1nb4a_
        complexed with 452
      2. 2221146Domain d2qe2b_: 2qe2 B: [167556]
        automated match to d1nb4a_
        complexed with 452
    17. Domains for 2qe5:
      1. 2221114Domain d2qe5a_: 2qe5 A: [167559]
        automated match to d1nb4a_
        complexed with 617
      2. 2221115Domain d2qe5b_: 2qe5 B: [167560]
        automated match to d1nb4a_
        complexed with 617
      3. 2221116Domain d2qe5c_: 2qe5 C: [167561]
        automated match to d1nb4a_
        complexed with 617
      4. 2221117Domain d2qe5d_: 2qe5 D: [167562]
        automated match to d1nb4a_
        complexed with 617
    18. Domains for 2who:
      1. 2221070Domain d2whoa_: 2who A: [206824]
        automated match to d1gx5a_
        protein/RNA complex; complexed with mn, vgi
      2. 2221071Domain d2whob_: 2who B: [206825]
        automated match to d1gx5a_
        protein/RNA complex; complexed with mn, vgi
    19. Domain for 2wrm:
    20. Domains for 2zku:
      1. 2221039Domain d2zkua_: 2zku A: [171292]
        automated match to d1nb4a_
        complexed with acy, gol
      2. 2221040Domain d2zkub_: 2zku B: [171293]
        automated match to d1nb4a_
        complexed with acy, gol
      3. 2221041Domain d2zkuc_: 2zku C: [171294]
        automated match to d1nb4a_
        complexed with acy, gol
      4. 2221042Domain d2zkud_: 2zku D: [171295]
        automated match to d1nb4a_
        complexed with acy, gol
    21. Domains for 3ciz:
      1. 2221024Domain d3ciza1: 3ciz A:2-563 [173264]
        Other proteins in same PDB: d3ciza2, d3cizb2
        automated match to d1nb4a_
        protein/RNA complex; complexed with sx1, zn
      2. 2221025Domain d3cizb1: 3ciz B:2-564 [173265]
        Other proteins in same PDB: d3ciza2, d3cizb2
        automated match to d1nb4a_
        protein/RNA complex; complexed with sx1, zn
    22. Domains for 3cj0:
      1. 2221029Domain d3cj0a1: 3cj0 A:2-563 [173266]
        Other proteins in same PDB: d3cj0a2, d3cj0b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with sx2
      2. 2221030Domain d3cj0b1: 3cj0 B:2-563 [173267]
        Other proteins in same PDB: d3cj0a2, d3cj0b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with sx2
    23. Domains for 3cj2:
      1. 2221020Domain d3cj2a1: 3cj2 A:2-562 [173268]
        Other proteins in same PDB: d3cj2a2, d3cj2b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with ni, sx3
      2. 2221021Domain d3cj2b1: 3cj2 B:2-562 [173269]
        Other proteins in same PDB: d3cj2a2, d3cj2b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with ni, sx3
    24. Domains for 3cj3:
      1. 2221037Domain d3cj3a1: 3cj3 A:2-563 [173270]
        Other proteins in same PDB: d3cj3a2, d3cj3b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with ni, sx4
      2. 2221038Domain d3cj3b1: 3cj3 B:2-563 [173271]
        Other proteins in same PDB: d3cj3a2, d3cj3b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with ni, sx4
    25. Domains for 3cj4:
      1. 2221075Domain d3cj4a1: 3cj4 A:2-562 [173272]
        Other proteins in same PDB: d3cj4a2, d3cj4b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with ni, sx5
      2. 2221076Domain d3cj4b1: 3cj4 B:2-562 [173273]
        Other proteins in same PDB: d3cj4a2, d3cj4b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with ni, sx5
    26. Domains for 3cj5:
      1. 2221035Domain d3cj5a1: 3cj5 A:2-563 [173274]
        Other proteins in same PDB: d3cj5a2, d3cj5b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with sx6
      2. 2221036Domain d3cj5b1: 3cj5 B:2-564 [173275]
        Other proteins in same PDB: d3cj5a2, d3cj5b2
        automated match to d1nb4a_
        protein/RNA complex; complexed with sx6
    27. Domain for 3frz:
    28. Domains for 3h59:
      1. 2221066Domain d3h59a1: 3h59 A:2-562 [177195]
        Other proteins in same PDB: d3h59a2, d3h59b2
        automated match to d1nb4a_
        complexed with h59
      2. 2221067Domain d3h59b1: 3h59 B:2-562 [177196]
        Other proteins in same PDB: d3h59a2, d3h59b2
        automated match to d1nb4a_
        complexed with h59
    29. Domains for 3h5s:
      1. 2221056Domain d3h5sa1: 3h5s A:2-562 [177201]
        Other proteins in same PDB: d3h5sa2, d3h5sb2
        automated match to d1nb4a_
        complexed with h5s
      2. 2221057Domain d3h5sb1: 3h5s B:2-562 [177202]
        Other proteins in same PDB: d3h5sa2, d3h5sb2
        automated match to d1nb4a_
        complexed with h5s
    30. Domains for 3h5u:
      1. 2221046Domain d3h5ua1: 3h5u A:2-563 [177203]
        Other proteins in same PDB: d3h5ua2, d3h5ub2
        automated match to d1nb4a_
        complexed with h5u
      2. 2221047Domain d3h5ub1: 3h5u B:2-563 [177204]
        Other proteins in same PDB: d3h5ua2, d3h5ub2
        automated match to d1nb4a_
        complexed with h5u
    31. Domains for 3hky:
      1. 2221022Domain d3hkya1: 3hky A:1-563 [177660]
        Other proteins in same PDB: d3hkya2
        automated match to d1nb4a_
        complexed with cl, ix6, so4
      2. 2221023Domain d3hkyb_: 3hky B: [177661]
        Other proteins in same PDB: d3hkya2
        automated match to d1nb4a_
        complexed with cl, ix6, so4
    32. Domains for 3lkh:
      1. 2221062Domain d3lkha_: 3lkh A: [180342]
        automated match to d1nb4a_
        complexed with lt6
      2. 2221063Domain d3lkhb_: 3lkh B: [180343]
        automated match to d1nb4a_
        complexed with lt6
    33. Domains for 3mf5:
      1. 2221033Domain d3mf5a1: 3mf5 A:2-562 [181043]
        Other proteins in same PDB: d3mf5a2, d3mf5b2
        automated match to d1c2pb_
        complexed with gol, hjz
      2. 2221034Domain d3mf5b1: 3mf5 B:2-562 [181044]
        Other proteins in same PDB: d3mf5a2, d3mf5b2
        automated match to d1c2pb_
        complexed with gol, hjz
    34. Domains for 3mwv:
      1. 2221079Domain d3mwva_: 3mwv A: [181653]
        automated match to d1nb4a_
      2. 2221080Domain d3mwvb_: 3mwv B: [181654]
        automated match to d1nb4a_
    35. Domains for 3mww:
      1. 2221125Domain d3mwwa_: 3mww A: [181655]
        automated match to d1nb4a_
        complexed with biw, so4
      2. 2221126Domain d3mwwb_: 3mww B: [181656]
        automated match to d1nb4a_
        complexed with biw, so4
    36. Domains for 3q0z:
      1. 2221085Domain d3q0za_: 3q0z A: [184133]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 23e, so4
      2. 2221086Domain d3q0zb_: 3q0z B: [184134]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 23e, so4
    37. Domains for 3qgd:
      1. 2221106Domain d3qgda_: 3qgd A: [184371]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 23e, 26s, so4
      2. 2221107Domain d3qgdb_: 3qgd B: [184372]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 23e, 26s, so4
    38. Domains for 3qge:
      1. 2221133Domain d3qgea_: 3qge A: [248881]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 26f, so4
      2. 2221134Domain d3qgeb_: 3qge B: [248882]
        automated match to d3q0za_
        protein/RNA complex; complexed with 23e, 26f, so4
    39. Domains for 3qgf:
      1. 2221104Domain d3qgfa_: 3qgf A: [184373]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 23e, 46f, so4
      2. 2221105Domain d3qgfb_: 3qgf B: [184374]
        automated match to d1nb4a_
        protein/RNA complex; complexed with 23e, 46f, so4
    40. Domain for 3ska:
    41. Domains for 3skh:
      1. 2221100Domain d3skha_: 3skh A: [216431]
        automated match to d3lkha_
        protein/RNA complex; complexed with 058
      2. 2221101Domain d3skhb_: 3skh B: [216432]
        automated match to d3lkha_
        protein/RNA complex; complexed with 058
    42. Domains for 3tyq:
      1. 2221011Domain d3tyqa_: 3tyq A: [186013]
        automated match to d1nb4a_
        protein/RNA complex; complexed with hi4, po4
      2. 2221012Domain d3tyqb_: 3tyq B: [186014]
        automated match to d1nb4a_
        protein/RNA complex; complexed with hi4, po4
    43. Domains for 3tyv:
      1. 2221013Domain d3tyva_: 3tyv A: [186015]
        automated match to d1nb4a_
        protein/RNA complex; complexed with hi3, po4
      2. 2221014Domain d3tyvb_: 3tyv B: [186016]
        automated match to d1nb4a_
        protein/RNA complex; complexed with hi3, po4
    44. Domains for 3u4o:
      1. 2221017Domain d3u4oa_: 3u4o A: [186076]
        automated match to d1nb4a_
        complexed with 08e, po4
      2. 2221018Domain d3u4ob_: 3u4o B: [186077]
        automated match to d1nb4a_
        complexed with 08e, po4
    45. Domains for 3u4r:
      1. 2221058Domain d3u4ra_: 3u4r A: [186078]
        automated match to d1nb4a_
        complexed with 08f
      2. 2221059Domain d3u4rb_: 3u4r B: [186079]
        automated match to d1nb4a_
        complexed with 08f
    46. Domains for 4dru:
      1. 2221054Domain d4drua_: 4dru A: [195587]
        automated match to d1nb4a_
        complexed with 0ln, gol, so4
      2. 2221055Domain d4drub_: 4dru B: [195588]
        automated match to d1nb4a_
        complexed with 0ln, gol, so4
    47. Domains for 4eaw:
      1. 2221031Domain d4eawa_: 4eaw A: [196703]
        automated match to d1nb4a_
        complexed with 0nq, edo, peg, so4
      2. 2221032Domain d4eawb_: 4eaw B: [201821]
        automated match to d4eawa_
        complexed with 0nq, edo, peg, so4
    48. Domains for 4gmc:
      1. 2221118Domain d4gmca_: 4gmc A: [221997]
        automated match to d3mwva_
        complexed with 1bi, so4
      2. 2221119Domain d4gmcb_: 4gmc B: [221998]
        automated match to d3mwva_
        complexed with 1bi, so4
    49. Domains for 4ih5:
      1. 2221027Domain d4ih5a1: 4ih5 A:2-562 [223170]
        Other proteins in same PDB: d4ih5a2, d4ih5b2
        automated match to d3mf5a_
        complexed with 12r
      2. 2221028Domain d4ih5b1: 4ih5 B:2-562 [223171]
        Other proteins in same PDB: d4ih5a2, d4ih5b2
        automated match to d3mf5a_
        complexed with 12r
    50. Domains for 4ih6:
      1. 2221077Domain d4ih6a1: 4ih6 A:2-562 [223172]
        Other proteins in same PDB: d4ih6a2, d4ih6b2
        automated match to d3mf5a_
        complexed with 1ep
      2. 2221078Domain d4ih6b1: 4ih6 B:2-562 [223173]
        Other proteins in same PDB: d4ih6a2, d4ih6b2
        automated match to d3mf5a_
        complexed with 1ep
    51. Domains for 4ih7:
      1. 2221094Domain d4ih7a1: 4ih7 A:2-562 [223174]
        Other proteins in same PDB: d4ih7a2, d4ih7b2
        automated match to d3mf5a_
        complexed with 1er, zn
      2. 2221095Domain d4ih7b1: 4ih7 B:2-562 [223175]
        Other proteins in same PDB: d4ih7a2, d4ih7b2
        automated match to d3mf5a_
        complexed with 1er, zn
    52. Domain for 4iz0:
    53. Domains for 4j04:
      1. 2221043Domain d4j04a_: 4j04 A: [223496]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jf, mn
      2. 2221044Domain d4j04b_: 4j04 B: [223497]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jf, mn
    54. Domains for 4j06:
      1. 2221048Domain d4j06a_: 4j06 A: [223498]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jg
      2. 2221049Domain d4j06b_: 4j06 B: [223499]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jg
    55. Domains for 4j08:
      1. 2221073Domain d4j08a_: 4j08 A: [223500]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jh
      2. 2221074Domain d4j08b_: 4j08 B: [223501]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jh
    56. Domains for 4j0a:
      1. 2221110Domain d4j0aa_: 4j0a A: [223502]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jl
      2. 2221111Domain d4j0ab_: 4j0a B: [223503]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1jl
    57. Domains for 4jjs:
      1. 2221089Domain d4jjsa_: 4jjs A: [223845]
        automated match to d3mwva_
        complexed with 1m9, mg
      2. 2221090Domain d4jjsb_: 4jjs B: [223846]
        automated match to d3mwva_
        complexed with 1m9, mg
    58. Domain for 4jju:
    59. Domains for 4jty:
      1. 2221127Domain d4jtya_: 4jty A: [224025]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1nv, gol, mg
      2. 2221128Domain d4jtyb_: 4jty B: [224026]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1nv, gol, mg
    60. Domains for 4jtz:
      1. 2221143Domain d4jtza_: 4jtz A: [224027]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1nw, gol, mg
      2. 2221144Domain d4jtzb_: 4jtz B: [224028]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1nw, gol, mg
    61. Domains for 4ju1:
      1. 2221137Domain d4ju1a_: 4ju1 A: [224029]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1nz, gol, mg
      2. 2221138Domain d4ju1b_: 4ju1 B: [224030]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1nz, gol, mg
    62. Domains for 4ju2:
      1. 2221131Domain d4ju2a_: 4ju2 A: [224031]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o0, gol, mg
      2. 2221132Domain d4ju2b_: 4ju2 B: [224032]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o0, gol, mg
    63. Domains for 4ju3:
      1. 2221098Domain d4ju3a_: 4ju3 A: [229256]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o1, mg
      2. 2221099Domain d4ju3b_: 4ju3 B: [229260]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o1, mg
    64. Domains for 4ju4:
      1. 2221120Domain d4ju4a_: 4ju4 A: [229261]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o3, mg
      2. 2221121Domain d4ju4b_: 4ju4 B: [229262]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o3, mg
    65. Domains for 4ju6:
      1. 2221112Domain d4ju6a_: 4ju6 A: [229258]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o6, mg
      2. 2221113Domain d4ju6b_: 4ju6 B: [229257]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o6, mg
    66. Domains for 4ju7:
      1. 2221122Domain d4ju7a_: 4ju7 A: [229255]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o6, mg
      2. 2221123Domain d4ju7b_: 4ju7 B: [229259]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1o6, mg
    67. Domains for 4jvq:
      1. 2221108Domain d4jvqa_: 4jvq A: [236552]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1ml, gol, mg
      2. 2221109Domain d4jvqb_: 4jvq B: [236553]
        automated match to d3mwva_
        protein/RNA complex; complexed with 1ml, gol, mg
    68. Domains for 4mk7:
      1. 2221141Domain d4mk7a1: 4mk7 A:2-562 [228253]
        Other proteins in same PDB: d4mk7a2, d4mk7b2
        automated match to d3mf5a_
        complexed with 28o, dms, mg
      2. 2221142Domain d4mk7b1: 4mk7 B:2-562 [228252]
        Other proteins in same PDB: d4mk7a2, d4mk7b2
        automated match to d3mf5a_
        complexed with 28o, dms, mg
    69. Domains for 4mk8:
      1. 2221096Domain d4mk8a1: 4mk8 A:2-562 [228259]
        Other proteins in same PDB: d4mk8a2, d4mk8b2
        automated match to d3mf5a_
        complexed with 28q, dms, gol
      2. 2221097Domain d4mk8b1: 4mk8 B:2-562 [228261]
        Other proteins in same PDB: d4mk8a2, d4mk8b2
        automated match to d3mf5a_
        complexed with 28q, dms, gol
    70. Domains for 4mk9:
      1. 2221087Domain d4mk9a1: 4mk9 A:2-562 [228258]
        Other proteins in same PDB: d4mk9a2, d4mk9b2
        automated match to d3mf5a_
        complexed with 28r, gol
      2. 2221088Domain d4mk9b1: 4mk9 B:2-562 [228260]
        Other proteins in same PDB: d4mk9a2, d4mk9b2
        automated match to d3mf5a_
        complexed with 28r, gol
    71. Domains for 4mka:
      1. 2221083Domain d4mkaa1: 4mka A:2-562 [228256]
        Other proteins in same PDB: d4mkaa2, d4mkab2
        automated match to d3mf5a_
        complexed with 2ay, dms, gol
      2. 2221084Domain d4mkab1: 4mka B:2-562 [228257]
        Other proteins in same PDB: d4mkaa2, d4mkab2
        automated match to d3mf5a_
        complexed with 2ay, dms, gol
    72. Domains for 4mkb:
      1. 2221068Domain d4mkba1: 4mkb A:2-562 [228254]
        Other proteins in same PDB: d4mkba2, d4mkbb2
        automated match to d3mf5a_
        complexed with 28v
      2. 2221069Domain d4mkbb1: 4mkb B:2-562 [228255]
        Other proteins in same PDB: d4mkba2, d4mkbb2
        automated match to d3mf5a_
        complexed with 28v
  9. 2221147Hepatitis C virus [TaxId:356411] [193797] (2 PDB entries)
    1. Domain for 4e76:
    2. Domain for 4e78:
  10. 2221150Human poliovirus 1 [TaxId:12081] [256393] (8 PDB entries)
    1. Domain for 2ijf:
    2. Domain for 2ily:
    3. Domain for 2ilz:
    4. Domain for 2im0:
    5. Domain for 2im1:
    6. Domain for 2im2:
    7. Domain for 2im3:
    8. Domain for 4r0e:
  11. 2221159Human rhinovirus 14, HRV-14 [TaxId:12131] [111301] (2 PDB entries)
    Uniprot P03303 1720-2179
    1. Domain for 1teb:
    2. Domain for 1xr5:
  12. 2221162Human rhinovirus 16 [TaxId:31708] [188024] (2 PDB entries)
    1. Domains for 1tp7:
      1. 2221163Domain d1tp7a_: 1tp7 A: [161779]
        automated match to d1xr6a_
        complexed with dmx, so4
      2. 2221164Domain d1tp7b_: 1tp7 B: [161780]
        automated match to d1xr6a_
        complexed with dmx, so4
      3. 2221165Domain d1tp7c_: 1tp7 C: [161781]
        automated match to d1xr6a_
        complexed with dmx, so4
      4. 2221166Domain d1tp7d_: 1tp7 D: [161782]
        automated match to d1xr6a_
        complexed with dmx, so4
    2. Domains for 4k50:
      1. 2221167Domain d4k50a_: 4k50 A: [202832]
        Other proteins in same PDB: d4k50i_
        automated match to d1tp7a_
        protein/RNA complex; complexed with act, gol, so4
      2. 2221168Domain d4k50e_: 4k50 E: [202833]
        Other proteins in same PDB: d4k50i_
        automated match to d1tp7a_
        protein/RNA complex; complexed with act, gol, so4
      3. 2221169Domain d4k50m_: 4k50 M: [202834]
        Other proteins in same PDB: d4k50i_
        automated match to d1tp7a_
        protein/RNA complex; complexed with act, gol, so4
  13. 2221170Human rhinovirus 16, HRV-16 [TaxId:31708] [111300] (2 PDB entries)
    Uniprot Q82122 1694-2153
    1. Domains for 1te9:
      1. 2221171Domain d1te9a_: 1te9 A: [303082]
        automated match to d1xr7a_
      2. 2221172Domain d1te9b_: 1te9 B: [303083]
        automated match to d1xr7a_
    2. Domains for 1xr7:
      1. 2221173Domain d1xr7a_: 1xr7 A: [115866]
      2. 2221174Domain d1xr7b_: 1xr7 B: [115867]
  14. 2221175Human rhinovirus 1B, HRV-1B [TaxId:12129] [111299] (2 PDB entries)
    Uniprot P12916 1698-2157
    1. Domain for 1te8:
    2. Domain for 1xr6:
  15. 2221178Norwalk virus [TaxId:11983] [103400] (8 PDB entries)
    1. Domains for 1sh0:
      1. 2221183Domain d1sh0a_: 1sh0 A: [98876]
      2. 2221184Domain d1sh0b_: 1sh0 B: [98877]
    2. Domain for 1sh2:
    3. Domains for 1sh3:
      1. 2221187Domain d1sh3a_: 1sh3 A: [98879]
        complexed with mg
      2. 2221188Domain d1sh3b_: 1sh3 B: [98880]
        complexed with mg
    4. Domain for 3bsn:
    5. Domain for 3bso:
    6. Domain for 3h5x:
    7. Domain for 3h5y:
    8. Domain for 4qpx:
  16. 2221189Poliovirus type 1, strain Mahoney [TaxId:12080] [56696] (12 PDB entries)
    Uniprot P03300 1748-2208
    1. Domain for 1ra6:
    2. Domain for 1ra7:
    3. Domain for 1raj:
    4. Domain for 1rdr:
    5. Domain for 1tql:
    6. Domains for 2ijd:
      1. 2221219Domain d2ijd12: 2ijd 1:184-644 [137475]
        Other proteins in same PDB: d2ijd11, d2ijd21
        automatically matched to d1ra6a_
        complexed with so4, zn
      2. 2221220Domain d2ijd22: 2ijd 2:184-644 [137477]
        Other proteins in same PDB: d2ijd11, d2ijd21
        automatically matched to d1ra6a_
        complexed with so4, zn
    7. Domains for 3ol6:
      1. 2221203Domain d3ol6a_: 3ol6 A: [183110]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, zn
      2. 2221204Domain d3ol6e_: 3ol6 E: [183111]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, zn
      3. 2221205Domain d3ol6i_: 3ol6 I: [183112]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, zn
      4. 2221206Domain d3ol6m_: 3ol6 M: [183113]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, zn
    8. Domains for 3ol7:
      1. 2221211Domain d3ol7a_: 3ol7 A: [183114]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn
      2. 2221212Domain d3ol7e_: 3ol7 E: [183115]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn
      3. 2221213Domain d3ol7i_: 3ol7 I: [183116]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn
      4. 2221214Domain d3ol7m_: 3ol7 M: [183117]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mg, peg, pop, zn
    9. Domains for 3ol8:
      1. 2221215Domain d3ol8a_: 3ol8 A: [183118]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mn, pop, zn
      2. 2221216Domain d3ol8e_: 3ol8 E: [183119]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mn, pop, zn
      3. 2221217Domain d3ol8i_: 3ol8 I: [183120]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mn, pop, zn
      4. 2221218Domain d3ol8m_: 3ol8 M: [183121]
        automated match to d1ra6a_
        protein/RNA complex; complexed with gol, ipa, mn, pop, zn
    10. Domains for 3ol9:
      1. 2221191Domain d3ol9a_: 3ol9 A: [183122]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, pop, zn
      2. 2221192Domain d3ol9e_: 3ol9 E: [183123]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, pop, zn
      3. 2221193Domain d3ol9i_: 3ol9 I: [183124]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, pop, zn
      4. 2221194Domain d3ol9m_: 3ol9 M: [183125]
        automated match to d1ra6a_
        protein/RNA complex; complexed with ipa, pop, zn
    11. Domains for 3ola:
      1. 2221207Domain d3olaa_: 3ola A: [183126]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dcp, gol, ipa, peg, zn
      2. 2221208Domain d3olae_: 3ola E: [183127]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dcp, gol, ipa, peg, zn
      3. 2221209Domain d3olai_: 3ola I: [183128]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dcp, gol, ipa, peg, zn
      4. 2221210Domain d3olam_: 3ola M: [183129]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dcp, gol, ipa, peg, zn
    12. Domains for 3olb:
      1. 2221198Domain d3olba_: 3olb A: [183130]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dct, ipa, zn
      2. 2221199Domain d3olbe_: 3olb E: [183131]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dct, ipa, zn
      3. 2221200Domain d3olbi_: 3olb I: [183132]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dct, ipa, zn
      4. 2221201Domain d3olbm_: 3olb M: [183133]
        automated match to d1ra6a_
        protein/RNA complex; complexed with dct, ipa, zn
  17. 2221221Rabbit hemorrhagic disease virus [TaxId:11976] [69882] (2 PDB entries)
    1. Domains for 1khv:
      1. 2221222Domain d1khva_: 1khv A: [68627]
        protein/RNA complex; complexed with lu
      2. 2221223Domain d1khvb_: 1khv B: [68628]
        protein/RNA complex; complexed with lu
    2. Domains for 1khw:
      1. 2221224Domain d1khwa_: 1khw A: [68629]
        protein/RNA complex; complexed with mn
      2. 2221225Domain d1khwb_: 1khw B: [68630]
        protein/RNA complex; complexed with mn
  18. 2288058Hepatitis c virus genotype 2a (isolate jfh-1) [TaxId:356411] [331359] (1 PDB entry)

More info for Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase

Timeline for Protein Viral RNA polymerase from e.8.1.4: RNA-dependent RNA-polymerase: