SCOPe 2.08: Species: Mouse (Mus musculus) [TaxId: 10090]

Lineage for Species: Mouse (Mus musculus) [TaxId: 10090]

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
Superfamily b.2.5: p53-like transcription factors [49417] (8 families)
Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain [81315] (7 proteins)
automatically mapped to Pfam PF00554
Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain [49428] (3 species)
Species Mouse (Mus musculus) [TaxId:10090] [49429] (9 PDB entries)

PDB entries in Species: Mouse (Mus musculus) [TaxId: 10090]:

Domain(s) for 1ikn:
- Domain d1ikna2: 1ikn A:19-191 [22449]
  Other proteins in same PDB: d1ikna1, d1iknc_, d1iknd_
Domain(s) for 1le5:
1. Domain d1le5a2: 1le5 A:20-191 [84584]
  Other proteins in same PDB: d1le5a1, d1le5a3, d1le5b1, d1le5b2, d1le5e1, d1le5e3, d1le5f1, d1le5f2
  protein/DNA complex
2. Domain d1le5e2: 1le5 E:20-191 [84588]
  Other proteins in same PDB: d1le5a1, d1le5a3, d1le5b1, d1le5b2, d1le5e1, d1le5e3, d1le5f1, d1le5f2
  protein/DNA complex
Domain(s) for 1le9:
1. Domain d1le9a2: 1le9 A:20-191 [84592]
  Other proteins in same PDB: d1le9a1, d1le9a3, d1le9b1, d1le9b2, d1le9e1, d1le9e3, d1le9f1, d1le9f2
  protein/DNA complex
2. Domain d1le9e2: 1le9 E:20-191 [84596]
  Other proteins in same PDB: d1le9a1, d1le9a3, d1le9b1, d1le9b2, d1le9e1, d1le9e3, d1le9f1, d1le9f2
  protein/DNA complex
Domain(s) for 1lei:
- Domain d1leia2: 1lei A:20-191 [84600]
  Other proteins in same PDB: d1leia1, d1leia3, d1leib1, d1leib2
  protein/DNA complex
Domain(s) for 1ram:
1. Domain d1rama2: 1ram A:19-191 [22452]
  Other proteins in same PDB: d1rama1, d1ramb1
  protein/DNA complex; complexed with dtt
2. Domain d1ramb2: 1ram B:19-191 [22453]
  Other proteins in same PDB: d1rama1, d1ramb1
  protein/DNA complex; complexed with dtt
Domain(s) for 1vkx:
- Domain d1vkxa2: 1vkx A:19-191 [22454]
  Other proteins in same PDB: d1vkxa1, d1vkxb1, d1vkxb2
  protein/DNA complex
Domain(s) for 2i9t:
- Domain d2i9ta2: 2i9t A:19-190 [137130]
  Other proteins in same PDB: d2i9ta1, d2i9ta3, d2i9tb1, d2i9tb2
  automated match to d1gjia2
  protein/DNA complex
Domain(s) for 2ram:
1. Domain d2rama2: 2ram A:19-191 [22450]
  Other proteins in same PDB: d2rama1, d2ramb1
  protein/DNA complex; complexed with dtv
2. Domain d2ramb2: 2ram B:19-191 [22451]
  Other proteins in same PDB: d2rama1, d2ramb1
  protein/DNA complex; complexed with dtv
Domain(s) for 6ggr:
- Domain d6ggra1: 6ggr A:20-186 [356775]
  Other proteins in same PDB: d6ggra2
  automated match to d1bvoa_
  complexed with cl

More info for Species Mouse (Mus musculus) [TaxId:10090] from b.2.5.3 p65 subunit of NF-kappa B (NFKB), N-terminal domain

Timeline for Species Mouse (Mus musculus) [TaxId:10090] from b.2.5.3 p65 subunit of NF-kappa B (NFKB), N-terminal domain:

Species Mouse (Mus musculus) [TaxId:10090] from b.2.5.3 p65 subunit of NF-kappa B (NFKB), N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Species Mouse (Mus musculus) [TaxId:10090] from b.2.5.1 p65 subunit of NF-kappa B (NFKB), N-terminal domain
Species Mouse (Mus musculus) [TaxId:10090] from b.2.5.3 p65 subunit of NF-kappa B (NFKB), N-terminal domain appears in SCOPe 2.07