Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1505047Fold a.132: Heme oxygenase-like [48612] (1 superfamily)
    multihelical; bundle
  4. 1505048Superfamily a.132.1: Heme oxygenase-like [48613] (5 families) (S)
    duplication: contains two structural repeats of 3-helical motif
  5. 1505276Family a.132.1.0: automated matches [191333] (1 protein)
    not a true family
  6. 1505277Protein automated matches [190172] (8 species)
    not a true protein

Species:

  1. 1505278Helicobacter pylori [TaxId:210] [189118] (2 PDB entries)
    1. Domains for 2rd3:
      1. 1505281Domain d2rd3a_: 2rd3 A: [168050]
        automated match to d1to9b_
      2. 1505282Domain d2rd3d_: 2rd3 D: [168051]
        automated match to d1to9b_
    2. Domains for 3ibx:
      1. 1505279Domain d3ibxa_: 3ibx A: [199546]
        automated match to d3ibxd_
      2. 1505280Domain d3ibxd_: 3ibx D: [178229]
        automated match to d1to9b_
  2. 1505283Human (Homo sapiens) [TaxId:9606] [225276] (4 PDB entries)
    1. Domains for 2q32:
      1. 1505286Domain d2q32a_: 2q32 A: [205738]
        automated match to d1wova1
        complexed with oxn
      2. 1505287Domain d2q32b_: 2q32 B: [205739]
        automated match to d1wova1
        complexed with oxn
    2. Domains for 2qpp:
      1. 1505288Domain d2qppa_: 2qpp A: [205854]
        automated match to d1wova1
        complexed with hem
      2. 1505289Domain d2qppb_: 2qpp B: [205855]
        automated match to d1wova1
        complexed with hem
    3. Domains for 2rgz:
      1. 1505284Domain d2rgza_: 2rgz A: [206119]
        automated match to d1wova1
        complexed with hem
      2. 1505285Domain d2rgzb_: 2rgz B: [206120]
        automated match to d1wova1
        complexed with hem
    4. Domain for 4wmh:
  3. 1505291Pyrobaculum aerophilum [TaxId:178306] [187120] (2 PDB entries)
    1. Domains for 2gm7:
      1. 1505296Domain d2gm7b_: 2gm7 B: [135365]
        Other proteins in same PDB: d2gm7a1
        automated match to d1udda_
        complexed with gol, pe4, po4
      2. 1505297Domain d2gm7c_: 2gm7 C: [135366]
        Other proteins in same PDB: d2gm7a1
        automated match to d1udda_
        complexed with gol, pe4, po4
      3. 1505298Domain d2gm7d_: 2gm7 D: [135367]
        Other proteins in same PDB: d2gm7a1
        automated match to d1udda_
        complexed with gol, pe4, po4
    2. Domains for 2gm8:
      1. 1505292Domain d2gm8a_: 2gm8 A: [135368]
        automated match to d1udda_
        complexed with edo, hmh
      2. 1505293Domain d2gm8b_: 2gm8 B: [135369]
        automated match to d1udda_
        complexed with edo, hmh
      3. 1505294Domain d2gm8c_: 2gm8 C: [135370]
        automated match to d1udda_
        complexed with edo, hmh
      4. 1505295Domain d2gm8d_: 2gm8 D: [135371]
        automated match to d1udda_
        complexed with edo, hmh
  4. 1505299Ruegeria sp. [TaxId:292414] [189347] (1 PDB entry)
  5. 1505301Staphylococcus aureus [TaxId:282458] [194218] (1 PDB entry)
  6. 1505306Staphylococcus epidermidis [TaxId:176280] [189423] (1 PDB entry)
  7. 1505311Streptococcus pneumoniae [TaxId:170187] [186901] (1 PDB entry)
  8. 1505314Sulfolobus solfataricus [TaxId:273057] [225324] (1 PDB entry)

More info for Protein automated matches from a.132.1.0: automated matches

Timeline for Protein automated matches from a.132.1.0: automated matches: