Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2011416Fold a.132: Heme oxygenase-like [48612] (1 superfamily)
    multihelical; bundle
  4. 2011417Superfamily a.132.1: Heme oxygenase-like [48613] (5 families) (S)
    duplication: contains two structural repeats of 3-helical motif
  5. 2011656Family a.132.1.0: automated matches [191333] (1 protein)
    not a true family
  6. 2011657Protein automated matches [190172] (9 species)
    not a true protein

Species:

  1. 2011658Helicobacter pylori [TaxId:210] [189118] (2 PDB entries)
    1. Domains for 2rd3:
      1. 2011661Domain d2rd3a1: 2rd3 A:1-217 [168050]
        Other proteins in same PDB: d2rd3a2, d2rd3d2
        automated match to d1to9b_
      2. 2011662Domain d2rd3d1: 2rd3 D:1-217 [168051]
        Other proteins in same PDB: d2rd3a2, d2rd3d2
        automated match to d1to9b_
    2. Domains for 3ibx:
      1. 2011659Domain d3ibxa1: 3ibx A:1-217 [199546]
        Other proteins in same PDB: d3ibxa2, d3ibxd2
        automated match to d3ibxd_
      2. 2011660Domain d3ibxd1: 3ibx D:1-217 [178229]
        Other proteins in same PDB: d3ibxa2, d3ibxd2
        automated match to d1to9b_
  2. 2011663Human (Homo sapiens) [TaxId:9606] [225276] (7 PDB entries)
    1. Domains for 2q32:
      1. 2011666Domain d2q32a_: 2q32 A: [205738]
        automated match to d1wova1
        complexed with oxn
      2. 2011667Domain d2q32b_: 2q32 B: [205739]
        automated match to d1wova1
        complexed with oxn
    2. Domains for 2qpp:
      1. 2011668Domain d2qppa_: 2qpp A: [205854]
        automated match to d1wova1
        complexed with hem
      2. 2011669Domain d2qppb_: 2qpp B: [205855]
        automated match to d1wova1
        complexed with hem
    3. Domains for 2rgz:
      1. 2011664Domain d2rgza_: 2rgz A: [206119]
        automated match to d1wova1
        complexed with hem
      2. 2011665Domain d2rgzb_: 2rgz B: [206120]
        automated match to d1wova1
        complexed with hem
    4. Domain for 4wmh:
    5. Domains for 5uc8:
      1. 2286566Domain d5uc8c_: 5uc8 C: [329867]
        automated match to d2rgzb_
      2. 2286580Domain d5uc8d_: 5uc8 D: [329881]
        automated match to d2rgzb_
      3. 2286582Domain d5uc8b_: 5uc8 B: [329883]
        automated match to d2rgzb_
      4. 2286640Domain d5uc8a_: 5uc8 A: [329941]
        automated match to d2rgzb_
    6. Domains for 5uc9:
      1. 2286562Domain d5uc9d_: 5uc9 D: [329863]
        automated match to d2rgzb_
        complexed with myr
      2. 2286575Domain d5uc9a_: 5uc9 A: [329876]
        automated match to d2rgzb_
        complexed with myr
      3. 2286576Domain d5uc9b_: 5uc9 B: [329877]
        automated match to d2rgzb_
        complexed with myr
      4. 2286641Domain d5uc9c_: 5uc9 C: [329942]
        automated match to d2rgzb_
        complexed with myr
    7. Domains for 5uca:
      1. 2286556Domain d5ucad_: 5uca D: [329857]
        automated match to d2rgzb_
        complexed with dao
      2. 2286561Domain d5ucab_: 5uca B: [329862]
        automated match to d2rgzb_
        complexed with dao
      3. 2286638Domain d5ucac_: 5uca C: [329939]
        automated match to d2rgzb_
        complexed with dao
      4. 2286646Domain d5ucaa_: 5uca A: [329947]
        automated match to d2rgzb_
        complexed with dao
  3. 2011671Pyrobaculum aerophilum [TaxId:178306] [187120] (2 PDB entries)
    1. Domains for 2gm7:
      1. 2011676Domain d2gm7b2: 2gm7 B:2-212 [135365]
        Other proteins in same PDB: d2gm7a1, d2gm7a2, d2gm7b3, d2gm7c3, d2gm7d3
        automated match to d1udda_
        complexed with gol, pe4, po4
      2. 2011677Domain d2gm7c2: 2gm7 C:2-212 [135366]
        Other proteins in same PDB: d2gm7a1, d2gm7a2, d2gm7b3, d2gm7c3, d2gm7d3
        automated match to d1udda_
        complexed with gol, pe4, po4
      3. 2011678Domain d2gm7d2: 2gm7 D:2-212 [135367]
        Other proteins in same PDB: d2gm7a1, d2gm7a2, d2gm7b3, d2gm7c3, d2gm7d3
        automated match to d1udda_
        complexed with gol, pe4, po4
    2. Domains for 2gm8:
      1. 2011672Domain d2gm8a2: 2gm8 A:2-212 [135368]
        Other proteins in same PDB: d2gm8a3, d2gm8b3, d2gm8c3, d2gm8d3
        automated match to d1udda_
        complexed with edo, hmh
      2. 2011673Domain d2gm8b2: 2gm8 B:2-212 [135369]
        Other proteins in same PDB: d2gm8a3, d2gm8b3, d2gm8c3, d2gm8d3
        automated match to d1udda_
        complexed with edo, hmh
      3. 2011674Domain d2gm8c2: 2gm8 C:2-212 [135370]
        Other proteins in same PDB: d2gm8a3, d2gm8b3, d2gm8c3, d2gm8d3
        automated match to d1udda_
        complexed with edo, hmh
      4. 2011675Domain d2gm8d2: 2gm8 D:2-212 [135371]
        Other proteins in same PDB: d2gm8a3, d2gm8b3, d2gm8c3, d2gm8d3
        automated match to d1udda_
        complexed with edo, hmh
  4. 2011679Ruegeria sp. [TaxId:292414] [189347] (1 PDB entry)
  5. 2011681Staphylococcus aureus [TaxId:282458] [194218] (1 PDB entry)
  6. 2011686Staphylococcus epidermidis [TaxId:176280] [189423] (1 PDB entry)
  7. 2011691Streptococcus pneumoniae [TaxId:170187] [186901] (1 PDB entry)
  8. 2011694Sulfolobus solfataricus [TaxId:273057] [225324] (1 PDB entry)
  9. 2293676Leptospira interrogans [TaxId:173] [336977] (1 PDB entry)

More info for Protein automated matches from a.132.1.0: automated matches

Timeline for Protein automated matches from a.132.1.0: automated matches: