SCOPe 2.04: Structural Classification of Proteins

PDB entry 2gm7

View 2gm7 on RCSB PDB site
Description: TenA Homolog/Thi-4 Thiaminase from Pyrobaculum Aerophilum
Class: transferase
Keywords: thiaminase, transcription, transferase
Deposited on 2006-04-06, released 2006-04-18
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.234
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: tenA homolog/Thi-4 Thiaminase
Species: Pyrobaculum aerophilum [TaxId:178306]
Gene: tena/thi4 (pag5_170)
Database cross-references and differences (RAF-indexed):
- Uniprot Q8ZZM9 (10-220)
  - cloning artifact (9)
Domains in SCOPe 2.04: d2gm7a1
Chain 'B':
Compound: tenA homolog/Thi-4 Thiaminase
Species: Pyrobaculum aerophilum [TaxId:178306]
Gene: tena/thi4 (pag5_170)
Database cross-references and differences (RAF-indexed):
- Uniprot Q8ZZM9 (10-220)
  - cloning artifact (9)
Domains in SCOPe 2.04: d2gm7b_
Chain 'C':
Compound: tenA homolog/Thi-4 Thiaminase
Species: Pyrobaculum aerophilum [TaxId:178306]
Gene: tena/thi4 (pag5_170)
Database cross-references and differences (RAF-indexed):
- Uniprot Q8ZZM9 (10-220)
  - cloning artifact (9)
Domains in SCOPe 2.04: d2gm7c_
Chain 'D':
Compound: tenA homolog/Thi-4 Thiaminase
Species: Pyrobaculum aerophilum [TaxId:178306]
Gene: tena/thi4 (pag5_170)
Database cross-references and differences (RAF-indexed):
- Uniprot Q8ZZM9 (10-220)
  - cloning artifact (5-9)
Domains in SCOPe 2.04: d2gm7d_
Heterogens: PO4, PE4, GOL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2gm7A (A:)
malhhhhhhgvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfa
kalslaasrapsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsy
maylkstcalegfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrg
lverlravldssglsaeelwpyfkeaslyelefwqaayegh

Sequence, based on observed residues (ATOM records): (download)

>2gm7A (A:)
gvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfakalslaasr
apsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsymaylkstca
legfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrglverlravl
dssglsaeelwpyfkeaslyelefwqaayegh

Chain 'B':
Sequence, based on SEQRES records: (download)

>2gm7B (B:)
malhhhhhhgvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfa
kalslaasrapsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsy
maylkstcalegfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrg
lverlravldssglsaeelwpyfkeaslyelefwqaayegh

Sequence, based on observed residues (ATOM records): (download)

>2gm7B (B:)
gvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfakalslaasr
apsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsymaylkstca
legfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrglverlravl
dssglsaeelwpyfkeaslyelefwqaayegh

Chain 'C':
Sequence, based on SEQRES records: (download)

>2gm7C (C:)
malhhhhhhgvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfa
kalslaasrapsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsy
maylkstcalegfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrg
lverlravldssglsaeelwpyfkeaslyelefwqaayegh

Sequence, based on observed residues (ATOM records): (download)

>2gm7C (C:)
gvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfakalslaasr
apsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsymaylkstca
legfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrglverlravl
dssglsaeelwpyfkeaslyelefwqaayegh

Chain 'D':
Sequence, based on SEQRES records: (download)

>2gm7D (D:)
malhhhhhhgvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfa
kalslaasrapsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsy
maylkstcalegfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrg
lverlravldssglsaeelwpyfkeaslyelefwqaayegh

Sequence, based on observed residues (ATOM records): (download)

>2gm7D (D:)
hhhhgvtgelrrradgiwqrilahpfvaelyagtlpmekfkyyllqdynylvnfakalsl
aasrapsvdlmktalelaygtvtgemanyeallkevglslrdaaeaepnrvnvsymaylk
stcalegfyqcmaallpcfwsyaeiaerhggklrenpvhvykkwasvylspeyrglverl
ravldssglsaeelwpyfkeaslyelefwqaayegh