Lineage for Protein: Pseudouridine synthase II TruB

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 881678Fold d.265: Pseudouridine synthase [100877] (1 superfamily)
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. 881679Superfamily d.265.1: Pseudouridine synthase [55120] (4 families) (S)
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
  5. 881694Family d.265.1.2: Pseudouridine synthase II TruB [69746] (1 protein)
    contains C-terminal PUA domain
  6. 881695Protein Pseudouridine synthase II TruB [69747] (5 species)

Species:

  1. 881696Archaeon Methanococcus jannaschii [TaxId:2190] [143435] (1 PDB entry)
    Uniprot Q57612 17-246
  2. 881698Archaeon Pyrococcus furiosus [TaxId:2261] [143434] (3 PDB entries)
    Uniprot Q7LWY0 5-249
    1. Domains for 2ey4:
      1. 881699Domain d2ey4a2: 2ey4 A:8-252 [132579]
        Other proteins in same PDB: d2ey4a1, d2ey4b1, d2ey4c1, d2ey4d1, d2ey4e1, d2ey4f1
        complexed with zn
      2. 881700Domain d2ey4b2: 2ey4 B:11-252 [132581]
        Other proteins in same PDB: d2ey4a1, d2ey4b1, d2ey4c1, d2ey4d1, d2ey4e1, d2ey4f1
        automatically matched to 2EY4 A:8-252
        complexed with zn
    2. Domain for 2hvy:
    3. Domain for 2rfk:
  3. 881703Escherichia coli [TaxId:562] [69748] (3 PDB entries)
    1. Domain for 1k8w:
    2. Domain for 1r3f:
    3. Domain for 1zl3:
  4. 881707Mycobacterium tuberculosis [TaxId:1773] [103017] (1 PDB entry)
  5. 881710Thermotoga maritima [TaxId:2336] [103016] (4 PDB entries)
    1. Domain for 1r3e:
    2. Domains for 1ze1:
      1. 881713Domain d1ze1a2: 1ze1 A:1-228 [124963]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automatically matched to d1r3ea2
        complexed with mg
      2. 881714Domain d1ze1b2: 1ze1 B:1-228 [124965]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automatically matched to d1r3ea2
        complexed with mg
      3. 881715Domain d1ze1c2: 1ze1 C:1-228 [124967]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automatically matched to d1r3ea2
        complexed with mg
      4. 881716Domain d1ze1d2: 1ze1 D:1-228 [124969]
        Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1
        automatically matched to d1r3ea2
        complexed with mg
    3. Domains for 1ze2:
      1. 881717Domain d1ze2a2: 1ze2 A:1-228 [124971]
        Other proteins in same PDB: d1ze2a1, d1ze2b1
        automatically matched to d1r3ea2
        complexed with fhu
      2. 881718Domain d1ze2b2: 1ze2 B:1-228 [124973]
        Other proteins in same PDB: d1ze2a1, d1ze2b1
        automatically matched to d1r3ea2
        complexed with fhu
    4. Domain for 2ab4:

More info for Protein Pseudouridine synthase II TruB from d.265.1.2: Pseudouridine synthase II TruB

Timeline for Protein Pseudouridine synthase II TruB from d.265.1.2: Pseudouridine synthase II TruB: