SCOP 1.75: Domain d2rfka1: 2rfk A:253-336

Lineage for d2rfka1 (2rfk A:253-336)

1. Root: SCOP 1.75

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.122: PUA domain-like [88696] (1 superfamily)
   pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other

4. Superfamily b.122.1: PUA domain-like [88697] (13 families)

5. Family b.122.1.1: PUA domain [88698] (6 proteins)
   RNA-binding domain

6. Protein Pseudouridine synthase II TruB, C-terminal domain [88699] (5 species)

7. Species Archaeon Pyrococcus furiosus [TaxId:2261] [141699] (3 PDB entries)
   Uniprot Q7LWY0 250-333

8. Domain d2rfka1: 2rfk A:253-336 [151996]
   Other proteins in same PDB: d2rfka2, d2rfkb1, d2rfkc1
   automatically matched to d2ey4a1
   complexed with zn; mutant

Details for d2rfka1

PDB Entry: 2rfk, 2.87 Å

PDB Description: substrate rna positioning in the archaeal h/aca ribonucleoprotein complex

PDB Compounds: (A:) Probable tRNA pseudouridine synthase B

SCOP Domain Sequences for d2rfka1:

Sequence; same for both SEQRES and ATOM records:

>d2rfka1 b.122.1.1 (A:253-336) Pseudouridine synthase II TruB, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
lpkvwikdsavaavthgadlavpgiaklhagikrgdlvaimtlkdelvalgkammtsqem
lektkgiavdvekvfmprdwypkl

Timeline for d2rfka1:

• d2rfka1 is new in SCOP 1.75
  
• d2rfka1 appears in SCOPe 2.01
  
• d2rfka1 appears in the current release, SCOPe 2.08