Class d: Alpha and beta proteins (a+b) [53931] (376 folds) |
Fold d.265: Pseudouridine synthase [100877] (1 superfamily) consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold |
Superfamily d.265.1: Pseudouridine synthase [55120] (4 families) the active site is the most conserved structural region of the superfamily and is located between the subdomains |
Family d.265.1.2: Pseudouridine synthase II TruB [69746] (1 protein) contains C-terminal PUA domain |
Protein Pseudouridine synthase II TruB [69747] (5 species) |
Escherichia coli [TaxId:562] [69748] (3 PDB entries) |
Domain d1k8wa5: 1k8w A:9-250 [90388] Other proteins in same PDB: d1k8wa3 protein/RNA complex; complexed with so4 |
Domain d1r3fa2: 1r3f A:8-250 [96910] Other proteins in same PDB: d1r3fa1 protein/RNA complex |
Domain d1zl3a2: 1zl3 A:10-250 [125236] Other proteins in same PDB: d1zl3a1 automatically matched to d1r3fa2 protein/RNA complex; complexed with so4 |
Methanococcus jannaschii [TaxId:2190] [143435] (1 PDB entry) Uniprot Q57612 17-246 |
Domain d2apoa2: 2apo A:17-246 [127134] Other proteins in same PDB: d2apoa1, d2apob_ protein/RNA complex; complexed with k, zn |
Mycobacterium tuberculosis [TaxId:1773] [103017] (1 PDB entry) |
Domain d1sgva2: 1sgv A:3-235 [98859] Other proteins in same PDB: d1sgva1, d1sgvb1 |
Domain d1sgvb2: 1sgv B:1-235 [98861] Other proteins in same PDB: d1sgva1, d1sgvb1 |
Pyrococcus furiosus [TaxId:2261] [143434] (3 PDB entries) Uniprot Q7LWY0 5-249 |
Domain d2ey4a2: 2ey4 A:8-252 [132579] Other proteins in same PDB: d2ey4a1, d2ey4b1, d2ey4c1, d2ey4d_, d2ey4e1, d2ey4f_ complexed with zn |
Domain d2ey4b2: 2ey4 B:11-252 [132581] Other proteins in same PDB: d2ey4a1, d2ey4b1, d2ey4c1, d2ey4d_, d2ey4e1, d2ey4f_ automatically matched to 2EY4 A:8-252 complexed with zn |
Domain d2hvya2: 2hvy A:11-252 [136818] Other proteins in same PDB: d2hvya1, d2hvyb1, d2hvyc1, d2hvyd1 automatically matched to 2EY4 A:8-252 protein/RNA complex; complexed with atp, zn |
Domain d2rfka2: 2rfk A:8-252 [151997] Other proteins in same PDB: d2rfka1, d2rfkb_, d2rfkc_ automatically matched to d2ey4a2 protein/RNA complex; complexed with zn |
Thermotoga maritima [TaxId:2336] [103016] (4 PDB entries) |
Domain d1r3ea2: 1r3e A:10-237 [96908] Other proteins in same PDB: d1r3ea1 protein/RNA complex |
Domain d1ze1a2: 1ze1 A:1-228 [124963] Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1 automatically matched to d1r3ea2 complexed with mg |
Domain d1ze1b2: 1ze1 B:1-228 [124965] Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1 automatically matched to d1r3ea2 complexed with mg |
Domain d1ze1c2: 1ze1 C:1-228 [124967] Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1 automatically matched to d1r3ea2 complexed with mg |
Domain d1ze1d2: 1ze1 D:1-228 [124969] Other proteins in same PDB: d1ze1a1, d1ze1b1, d1ze1c1, d1ze1d1 automatically matched to d1r3ea2 complexed with mg |
Domain d1ze2a2: 1ze2 A:1-228 [124971] Other proteins in same PDB: d1ze2a1, d1ze2b1 automatically matched to d1r3ea2 protein/RNA complex |
Domain d1ze2b2: 1ze2 B:1-228 [124973] Other proteins in same PDB: d1ze2a1, d1ze2b1 automatically matched to d1r3ea2 protein/RNA complex |
Domain d2ab4a2: 2ab4 A:1-228 [126506] Other proteins in same PDB: d2ab4a1 protein/RNA complex; complexed with zn |
Timeline for Protein Pseudouridine synthase II TruB from d.265.1.2: Pseudouridine synthase II TruB: