SCOPe 2.07: Protein: Dimethylsulfoxide reductase (DMSO reductase)

Lineage for Protein: Dimethylsulfoxide reductase (DMSO reductase)

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
contains of two similar intertwined domains related by pseudo dyad; duplication
core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (2 families)
molybdopterine enzyme
Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (11 proteins)
domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase
Protein Dimethylsulfoxide reductase (DMSO reductase) [53708] (2 species)

Species:

Rhodobacter capsulatus [TaxId:1061] [53710] (10 PDB entries)
1. Domain for 1dmr:
  - Domain d1dmra2: 1dmr A:3-625 [35312]
    Other proteins in same PDB: d1dmra1
    complexed with 6mo, o, pgd
2. Domain for 1dms:
  - Domain d1dmsa2: 1dms A:3-625 [35314]
    Other proteins in same PDB: d1dmsa1
    complexed with mm4, pgd
3. Domain for 1e18:
  - Domain d1e18a2: 1e18 A:3-625 [35315]
    Other proteins in same PDB: d1e18a1
    Tungsten-substituted
    complexed with 6wo, eoh, pgd
4. Domains for 1e5v:
  1. Domain d1e5va2: 1e5v A:3-625 [35320]
    Other proteins in same PDB: d1e5va1, d1e5vc1
    complexed with 2mo, pgd, so4
  2. Domain d1e5vc2: 1e5v C:3-625 [35321]
    Other proteins in same PDB: d1e5va1, d1e5vc1
    complexed with 2mo, pgd, so4
5. Domains for 1e60:
  1. Domain d1e60a2: 1e60 A:4-625 [35318]
    Other proteins in same PDB: d1e60a1, d1e60c1
    complexed with 2mo, pgd, so4
  2. Domain d1e60c2: 1e60 C:3-625 [35319]
    Other proteins in same PDB: d1e60a1, d1e60c1
    complexed with 2mo, pgd, so4
6. Domains for 1e61:
  1. Domain d1e61a2: 1e61 A:4-625 [35316]
    Other proteins in same PDB: d1e61a1, d1e61c1
    complexed with 2mo, pgd, so4
  2. Domain d1e61c2: 1e61 C:3-625 [35317]
    Other proteins in same PDB: d1e61a1, d1e61c1
    complexed with 2mo, pgd, so4
7. Domains for 1h5n:
  1. Domain d1h5na2: 1h5n A:4-625 [70895]
    Other proteins in same PDB: d1h5na1, d1h5nc1
    complexed with 6mo, pgd, so4
  2. Domain d1h5nc2: 1h5n C:3-625 [70897]
    Other proteins in same PDB: d1h5na1, d1h5nc1
    complexed with 6mo, pgd, so4
8. Domain for 2dmr:
  - Domain d2dmra2: 2dmr A:3-625 [35323]
    Other proteins in same PDB: d2dmra1
    complexed with 4mo, o, pgd, so2
9. Domain for 3dmr:
  - Domain d3dmra2: 3dmr A:3-625 [35322]
    Other proteins in same PDB: d3dmra1
    complexed with 6mo, o, pgd
10. Domain for 4dmr:
  - Domain d4dmra2: 4dmr A:3-625 [35313]
    Other proteins in same PDB: d4dmra1
    complexed with 4mo, dms, o, pgd
Rhodobacter sphaeroides [TaxId:1063] [53709] (1 PDB entry)
- Domain for 1eu1:
  - Domain d1eu1a2: 1eu1 A:4-625 [35311]
    Other proteins in same PDB: d1eu1a1
    complexed with 6mo, cd, epe, glc, mgd, o, so4

More info for Protein Dimethylsulfoxide reductase (DMSO reductase) from c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3

Timeline for Protein Dimethylsulfoxide reductase (DMSO reductase) from c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3:

Protein Dimethylsulfoxide reductase (DMSO reductase) from c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 first appeared (with stable ids) in SCOP 1.55
Protein Dimethylsulfoxide reductase (DMSO reductase) from c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 appears in SCOPe 2.06
Protein Dimethylsulfoxide reductase (DMSO reductase) from c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 appears in the current release, SCOPe 2.08