SCOPe 2.07: Domain d1dmsa2: 1dms A:3-625

Lineage for d1dmsa2 (1dms A:3-625)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
   contains of two similar intertwined domains related by pseudo dyad; duplication
   core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

4. Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (2 families)
   molybdopterine enzyme

5. Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (11 proteins)
   domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase

6. Protein Dimethylsulfoxide reductase (DMSO reductase) [53708] (2 species)

7. Species Rhodobacter capsulatus [TaxId:1061] [53710] (10 PDB entries)

8. Domain d1dmsa2: 1dms A:3-625 [35314]
   Other proteins in same PDB: d1dmsa1
   complexed with mm4, pgd

Details for d1dmsa2

PDB Entry: 1dms, 1.88 Å

PDB Description: structure of dmso reductase

PDB Compounds: (A:) dmso reductase

SCOPe Domain Sequences for d1dmsa2:

Sequence, based on SEQRES records:

>d1dmsa2 c.81.1.1 (A:3-625) Dimethylsulfoxide reductase (DMSO reductase) {Rhodobacter capsulatus [TaxId: 1061]}
langtvmsgshwgvftatvengrataftpwekdphptpmlegvldsiysptrikypmvrr
eflekgvnadrstrgngdfvrvswdqaldlvaaevkrveetygpqgvfggsygwkspgrl
hncttllrrmltlaggyvngagdystgaaqvimphvvgtlevyeqqtawpvlaentevmv
fwaadpiktsqigwvipehgaypglealkakgtkvividpvrtktveffgadhvtpkpqt
dvaimlgmahtlvaedlydkdfianytsgfdkflpylmgetdstpktaewasdisgvpae
tikelarlfkskrtmlaagwsmqrmhhgeqahwmlvtlasmlgqiglpgggfglsyhysg
ggtpsssgpalsgitdggaatkgpewlaasgasvipvarvvdmlenpgaefdfngtrskf
pdvkmaywvggnpfvhhqdrnrmvkawekletfivhdfqwtptarhadivlpattsyern
dietigdysntgilamkkiveplyearsdydifaavaerlgkgkeftegkdemgwiksfy
ddaakqgkaggvempafdafwaegivefpvtdgadfvryasfredpllnplgtptgliei
yskniekmgyddcpahptwmepl

Sequence, based on observed residues (ATOM records):

>d1dmsa2 c.81.1.1 (A:3-625) Dimethylsulfoxide reductase (DMSO reductase) {Rhodobacter capsulatus [TaxId: 1061]}
langtvmsgshwgvftatvengrataftpwekdphptpmlegvldsiysptrikypmvrr
eflekgvnadrstrgngdfvrvswdqaldlvaaevkrveetygpqgvfggsygwkspgrl
hncttllrrmltlaggyvngagdystgaaqvimphvvgtlevyeqqtawpvlaentevmv
fwaadpiktsqigwvipehgaypglealkakgtkvividpvrtktveffgadhvtpkpqt
dvaimlgmahtlvaedlydkdfianytsgfdkflpylmgetdstpktaewasdisgvpae
tikelarlfkskrtmlaagwsmqrmhhgeqahwmlvtlasmlgqiglpgggfglsyhysg
ggtpsssgpalsgitdggasvipvarvvdmlenpgaefdfngtrskfpdvkmaywvggnp
fvhhqdrnrmvkawekletfivhdfqwtptarhadivlpattsyerndietigdysntgi
lamkkiveplyearsdydifaavaerlgkgkeftegkdemgwiksfyddaakqgkaggve
mpafdafwaegivefpvtdgadfvryasfredpllnplgtptglieiyskniekmgyddc
pahptwmepl

Timeline for d1dmsa2:

• d1dmsa2 first appeared (with stable ids) in SCOP 1.55, called d1dms_2
  
• d1dmsa2 appears in SCOPe 2.06
  
• d1dmsa2 appears in the current release, SCOPe 2.08