Lineage for Species: Escherichia coli [TaxId: 562]
- Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds) 
Fold c.59: MurD-like peptide ligases, peptide-binding domain [53243] (1 superfamily)
3 layers: a/b/a; mixed beta-sheet of 6 strands, order 126345; strand 1 is antiparallel to the restSuperfamily c.59.1: MurD-like peptide ligases, peptide-binding domain [53244] (2 families) 
Family c.59.1.1: MurCDEF C-terminal domain [53245] (4 proteins) Protein UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD [53246] (1 species) Species Escherichia coli [TaxId:562] [53247] (11 PDB entries)
PDB entries in Species: Escherichia coli [TaxId: 562]:
- Domain(s) for 1e0d:
Domain d1e0da2: 1e0d A:298-437 [33956]
Other proteins in same PDB: d1e0da1, d1e0da3
complexed with so4
- Domain(s) for 1eeh:
Domain d1eeha2: 1eeh A:298-437 [33955]
Other proteins in same PDB: d1eeha1, d1eeha3
complexed with uma
- Domain(s) for 1uag:
Domain d1uaga2: 1uag A:298-437 [33954]
Other proteins in same PDB: d1uaga1, d1uaga3
complexed with so4, uma
- Domain(s) for 2jff:
Domain d2jffa2: 2jff A:298-437 [138304]
Other proteins in same PDB: d2jffa1, d2jffa3
automatically matched to d1e0da2
complexed with lk2, so4
- Domain(s) for 2jfg:
Domain d2jfga2: 2jfg A:298-437 [138307]
Other proteins in same PDB: d2jfga1, d2jfga3
automatically matched to d1e0da2
complexed with adp, so4, uma
- Domain(s) for 2jfh:
Domain d2jfha2: 2jfh A:298-437 [138310]
Other proteins in same PDB: d2jfha1, d2jfha3
automatically matched to d1e0da2
complexed with lk1, so4
- Domain(s) for 2uag:
Domain d2uaga2: 2uag A:298-437 [33951]
Other proteins in same PDB: d2uaga1, d2uaga3
complexed with adp, mg, uma
- Domain(s) for 2uuo:
Domain d2uuoa2: 2uuo A:298-437 [152198]
Other proteins in same PDB: d2uuoa1, d2uuoa3
automatically matched to d1e0da2
complexed with lk3, so4
- Domain(s) for 2uup:
Domain d2uupa2: 2uup A:298-437 [152201]
Other proteins in same PDB: d2uupa1, d2uupa3
automatically matched to d1e0da2
complexed with lk4, so4
- Domain(s) for 3uag:
Domain d3uaga2: 3uag A:298-437 [33953]
Other proteins in same PDB: d3uaga1, d3uaga3
complexed with adp, epe, mn, uma
- Domain(s) for 4uag:
Domain d4uaga2: 4uag A:298-437 [33952]
Other proteins in same PDB: d4uaga1, d4uaga3
complexed with so4, uag, unx
More info for Species Escherichia coli [TaxId:562] from c.59.1.1 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
Timeline for Species Escherichia coli [TaxId:562] from c.59.1.1 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD:
- Species Escherichia coli [TaxId:562] from c.59.1.1 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD first appeared (with stable ids) in SCOP 1.55, called Species Escherichia coli [TaxId:562] from c.59.1.1 MurD (UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase)
- Species Escherichia coli [TaxId:562] from c.59.1.1 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD appears in SCOPe 2.02
- Species Escherichia coli [TaxId:562] from c.59.1.1 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD appears in SCOPe 2.04
- Species Escherichia coli [TaxId:562] from c.59.1.1 UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD appears in the current release, SCOPe 2.08