SCOPe 2.07: Protein: Methionine aminopeptidase, insert domain

Lineage for Protein: Methionine aminopeptidase, insert domain

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (86 families)
contains a small beta-sheet (wing)
Family a.4.5.25: Methionine aminopeptidase, insert domain [46887] (1 protein)
circularly permuted version of the "winged helix" fold
Protein Methionine aminopeptidase, insert domain [46888] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [46890] (18 PDB entries)
Uniprot P50579 110-478
1. Domain for 1b59:
  - Domain d1b59a1: 1b59 A:375-448 [16225]
    Other proteins in same PDB: d1b59a2
    complexed with co, ova
2. Domain for 1b6a:
  - Domain d1b6aa1: 1b6a A:375-448 [16223]
    Other proteins in same PDB: d1b6aa2
    complexed with co, tn4
3. Domain for 1bn5:
  - Domain d1bn5a1: 1bn5 A:375-448 [16224]
    Other proteins in same PDB: d1bn5a2
    complexed with co, tbu
4. Domain for 1boa:
  - Domain d1boaa1: 1boa A:375-448 [16226]
    Other proteins in same PDB: d1boaa2
    complexed with co, fug
5. Domain for 1kq0:
  - Domain d1kq0a1: 1kq0 A:375-448 [91018]
    Other proteins in same PDB: d1kq0a2
    complexed with med, tbu, zn
6. Domain for 1kq9:
  - Domain d1kq9a1: 1kq9 A:375-448 [91021]
    Other proteins in same PDB: d1kq9a2
    complexed with met, tbu, zn
7. Domain for 1qzy:
  - Domain d1qzya1: 1qzy A:375-448 [96717]
    Other proteins in same PDB: d1qzya2
    complexed with co, tbu, tde
8. Domain for 1r58:
  - Domain d1r58a1: 1r58 A:375-448 [111695]
    Other proteins in same PDB: d1r58a2
    complexed with ao5, mn
9. Domain for 1r5g:
  - Domain d1r5ga1: 1r5g A:375-448 [111702]
    Other proteins in same PDB: d1r5ga2
    complexed with ao1, mn
10. Domain for 1r5h:
  - Domain d1r5ha1: 1r5h A:375-448 [111704]
    Other proteins in same PDB: d1r5ha2
    complexed with ao2, mn
11. Domain for 1yw7:
  - Domain d1yw7a1: 1yw7 A:375-448 [124134]
    Other proteins in same PDB: d1yw7a2
    automated match to d1r58a1
    complexed with a41, mn
12. Domain for 1yw8:
  - Domain d1yw8a1: 1yw8 A:375-448 [124136]
    Other proteins in same PDB: d1yw8a2
    automated match to d1r58a1
    complexed with a75, mn
13. Domain for 1yw9:
  - Domain d1yw9a1: 1yw9 A:375-448 [124138]
    Other proteins in same PDB: d1yw9a2
    automated match to d1r58a1
    complexed with a84, mn
14. Domain for 2adu:
  - Domain d2adua1: 2adu A:375-448 [126595]
    Other proteins in same PDB: d2adua2
    automated match to d1r58a1
    complexed with co, r20
15. Domain for 2ea2:
  - Domain d2ea2a1: 2ea2 A:375-448 [146757]
    Other proteins in same PDB: d2ea2a2
    automated match to d1r58a1
    complexed with f77, mn
16. Domain for 2ea4:
  - Domain d2ea4a1: 2ea4 A:375-448 [146759]
    Other proteins in same PDB: d2ea4a2
    automated match to d1r58a1
    complexed with f79, mn
17. Domain for 2ga2:
  - Domain d2ga2a1: 2ga2 A:375-448 [134852]
    Other proteins in same PDB: d2ga2a2
    automated match to d1r58a1
    complexed with a19, mn
18. Domain for 2oaz:
  - Domain d2oaza1: 2oaz A:375-448 [138999]
    Other proteins in same PDB: d2oaza2
    automated match to d1r58a1
    complexed with co, i96
Pyrococcus furiosus [TaxId:2261] [46889] (5 PDB entries)
1. Domains for 1wkm:
  1. Domain d1wkma2: 1wkm A:195-271 [202994]
    Other proteins in same PDB: d1wkma1, d1wkmb1
    automated match to d1xgsa1
    complexed with met, mn
  2. Domain d1wkmb2: 1wkm B:195-271 [202996]
    Other proteins in same PDB: d1wkma1, d1wkmb1
    automated match to d1xgsa1
    complexed with met, mn
2. Domains for 1xgm:
  1. Domain d1xgma1: 1xgm A:195-271 [16220]
    Other proteins in same PDB: d1xgma2, d1xgmb2
    complexed with co
  2. Domain d1xgmb1: 1xgm B:195-271 [16221]
    Other proteins in same PDB: d1xgma2, d1xgmb2
    complexed with co
3. Domains for 1xgn:
  1. Domain d1xgna1: 1xgn A:195-271 [16218]
    Other proteins in same PDB: d1xgna2, d1xgnb2
    complexed with co
  2. Domain d1xgnb1: 1xgn B:195-271 [16219]
    Other proteins in same PDB: d1xgna2, d1xgnb2
    complexed with co
4. Domain for 1xgo:
  - Domain d1xgoa1: 1xgo A:195-271 [16222]
    Other proteins in same PDB: d1xgoa2
5. Domains for 1xgs:
  1. Domain d1xgsa1: 1xgs A:195-271 [16216]
    Other proteins in same PDB: d1xgsa2, d1xgsb2
    complexed with co
  2. Domain d1xgsb1: 1xgs B:195-271 [16217]
    Other proteins in same PDB: d1xgsa2, d1xgsb2
    complexed with co

More info for Protein Methionine aminopeptidase, insert domain from a.4.5.25: Methionine aminopeptidase, insert domain

Timeline for Protein Methionine aminopeptidase, insert domain from a.4.5.25: Methionine aminopeptidase, insert domain:

Protein Methionine aminopeptidase, insert domain from a.4.5.25: Methionine aminopeptidase, insert domain first appeared (with stable ids) in SCOP 1.55
Protein Methionine aminopeptidase, insert domain from a.4.5.25: Methionine aminopeptidase, insert domain appears in SCOPe 2.06
Protein Methionine aminopeptidase, insert domain from a.4.5.25: Methionine aminopeptidase, insert domain appears in the current release, SCOPe 2.08