SCOPe 2.07: Domain d1wkmb2: 1wkm B:195-271

Lineage for d1wkmb2 (1wkm B:195-271)

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (86 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.25: Methionine aminopeptidase, insert domain [46887] (1 protein)
   circularly permuted version of the "winged helix" fold

6. Protein Methionine aminopeptidase, insert domain [46888] (2 species)

7. Species Pyrococcus furiosus [TaxId:2261] [46889] (5 PDB entries)

8. Domain d1wkmb2: 1wkm B:195-271 [202996]
   Other proteins in same PDB: d1wkma1, d1wkmb1
   automated match to d1xgsa1
   complexed with met, mn

Details for d1wkmb2

PDB Entry: 1wkm, 2.3 Å

PDB Description: the product bound form of the mn(ii)loaded methionine aminopeptidase from hyperthermophile pyrococcus furiosus

PDB Compounds: (B:) Methionine aminopeptidase

SCOPe Domain Sequences for d1wkmb2:

Sequence; same for both SEQRES and ATOM records:

>d1wkmb2 a.4.5.25 (B:195-271) Methionine aminopeptidase, insert domain {Pyrococcus furiosus [TaxId: 2261]}
gqvievpptliymyvrdvpvrvaqarfllakikreygtlpfayrwlqndmpegqlklalk
tlekagaiygypvlkei

Timeline for d1wkmb2:

• d1wkmb2 first appeared in SCOPe 2.03
  
• d1wkmb2 appears in SCOPe 2.06
  
• d1wkmb2 appears in the current release, SCOPe 2.08