Lineage for Protein: Griffithsin

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.77: beta-Prism I [51091] (4 superfamilies)
    consists of 3 4-stranded sheets; strands are parallel to the 3-fold axis
    duplication: has internal pseudo threefold symmetry
  4. Superfamily b.77.3: Mannose-binding lectins [51101] (2 families) (S)
  5. Family b.77.3.1: Mannose-binding lectins [51102] (7 proteins)
  6. Protein Griffithsin [141569] (2 species)
    single-chain subunits form a segment-swapped dimer

Species:

  1. Griffithsia sp. Q66D336 [TaxId:373036] [159279] (1 PDB entry)
  2. Red alga (Griffithsia) [TaxId:35158] [141570] (7 PDB entries)
    Uniprot P84801 1-121
    1. Domains for 2gty:
      1. Domain d2gtya1: 2gty A:1-121 [135713]
        complexed with edo, so4
      2. Domain d2gtyb1: 2gty B:1-121 [135714]
        automatically matched to 2GTY A:1-121
        complexed with edo, so4
    2. Domains for 2guc:
      1. Domain d2guca1: 2guc A:1-121 [135730]
        automatically matched to 2GTY A:1-121
        complexed with edo, man, so4
      2. Domain d2gucb1: 2guc B:1-121 [135731]
        automatically matched to 2GTY A:1-121
        complexed with edo, man, so4
    3. Domains for 2gud:
      1. Domain d2guda1: 2gud A:1-121 [135732]
        automatically matched to 2GTY A:1-121
        complexed with bma, edo, man, so4
      2. Domain d2gudb1: 2gud B:1-121 [135733]
        automatically matched to 2GTY A:1-121
        complexed with bma, edo, man, so4
    4. Domains for 2gue:
      1. Domain d2guea1: 2gue A:1-121 [135734]
        automatically matched to 2GTY A:1-121
        complexed with edo, nag, so4
      2. Domain d2gueb1: 2gue B:1-121 [135735]
        automatically matched to 2GTY A:1-121
        complexed with edo, nag, so4
    5. Domain for 2gux:
    6. Domains for 2hyq:
      1. Domain d2hyqa1: 2hyq A:1-121 [136901]
        automatically matched to 2GTY A:1-121
        complexed with so4
      2. Domain d2hyqb1: 2hyq B:1-121 [136902]
        automatically matched to 2GTY A:1-121
        complexed with so4
    7. Domains for 2hyr:
      1. Domain d2hyra1: 2hyr A:1-121 [136903]
        automatically matched to 2GTY A:1-121
        complexed with edo, mg, so4
      2. Domain d2hyrb1: 2hyr B:1-121 [136904]
        automatically matched to 2GTY A:1-121
        complexed with edo, mg, so4

More info for Protein Griffithsin from b.77.3.1: Mannose-binding lectins

Timeline for Protein Griffithsin from b.77.3.1: Mannose-binding lectins: