SCOPe 2.08: Protein: Agmatine iminohydrolase

Lineage for Protein: Agmatine iminohydrolase

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
Superfamily d.126.1: Pentein [55909] (8 families)
Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
Pfam PF04371; functionally related to the amidinotransferase, similar active site
Protein Agmatine iminohydrolase [111156] (3 species)

Species:

Enterococcus faecalis [TaxId:1351] [160717] (1 PDB entry)
Uniprot Q837U5 2-365
- Domains for 2jer:
  1. Domain d2jera1: 2jer A:2-365 [148019]
    Other proteins in same PDB: d2jerd3
  2. Domain d2jerb_: 2jer B: [148020]
    Other proteins in same PDB: d2jerd3
    automated match to d2jera1
  3. Domain d2jerc_: 2jer C: [148021]
    Other proteins in same PDB: d2jerd3
    automated match to d2jera1
  4. Domain d2jerd2: 2jer D:2-370 [148022]
    Other proteins in same PDB: d2jerd3
    automated match to d2jera1
  5. Domain d2jere_: 2jer E: [148023]
    Other proteins in same PDB: d2jerd3
    automated match to d2jera1
  6. Domain d2jerf_: 2jer F: [148024]
    Other proteins in same PDB: d2jerd3
    automated match to d2jera1
  7. Domain d2jerg_: 2jer G: [198115]
    Other proteins in same PDB: d2jerd3
    automated match to d2jera1
  8. Domain d2jerh_: 2jer H: [198116]
    Other proteins in same PDB: d2jerd3
    automated match to d2jera1

Streptococcus mutans [TaxId:1309] [143807] (1 PDB entry)
Uniprot Q8DW17 2-370

Domain for 2ewo:

Domain d2ewoa1: 2ewo A:2-369 [132476]
Other proteins in same PDB: d2ewoa2, d2ewob2, d2ewob3, d2ewoc2, d2ewoc3, d2ewod2, d2ewod3, d2ewoe2, d2ewoe3, d2ewof2, d2ewof3, d2ewog2, d2ewog3, d2ewoh2, d2ewoh3, d2ewoi2, d2ewoi3, d2ewoj2, d2ewoj3, d2ewok2, d2ewok3, d2ewol2, d2ewol3

Thale cress (Arabidopsis thaliana) [TaxId:3702] [111157] (1 PDB entry)
Uniprot Q8GWW7
- Domains for 1vkp:
  1. Domain d1vkpa_: 1vkp A: [108686]
    Structural genomics target
    complexed with edo, mg, mpo
  2. Domain d1vkpb_: 1vkp B: [108687]
    Structural genomics target
    complexed with edo, mg, mpo

More info for Protein Agmatine iminohydrolase from d.126.1.6: Porphyromonas-type peptidylarginine deiminase

Timeline for Protein Agmatine iminohydrolase from d.126.1.6: Porphyromonas-type peptidylarginine deiminase:

Protein Agmatine iminohydrolase from d.126.1.6: Porphyromonas-type peptidylarginine deiminase first appeared in SCOP 1.69, called Protein Agmatine iminohydrolase from d.126.1.6: Porphyromonas-type peptidylarginine deiminase (Pfam 04371)
Protein Agmatine iminohydrolase from d.126.1.6: Porphyromonas-type peptidylarginine deiminase appears in SCOPe 2.07