Lineage for Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2537906Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 2537907Superfamily d.126.1: Pentein [55909] (8 families) (S)
  5. 2537992Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
    Pfam PF04371; functionally related to the amidinotransferase, similar active site

Proteins:

  1. 2537993Agmatine iminohydrolase [111156] (3 species)
    1. 2537994Species Enterococcus faecalis [TaxId:1351] [160717] (1 PDB entry)
      Uniprot Q837U5 2-365
    2. 2538003Species Streptococcus mutans [TaxId:1309] [143807] (1 PDB entry)
      Uniprot Q8DW17 2-370
    3. 2538005Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [111157] (1 PDB entry)
      Uniprot Q8GWW7
  2. 2538008Putative peptidyl-arginine deiminase [111158] (3 species)
    1. 2538009Species Chlorobium tepidum [TaxId:1097] [118089] (1 PDB entry)
      Uniprot Q8KCB6
    2. 2538011Species Helicobacter pylori J99 [TaxId:85963] [111159] (2 PDB entries)
      Uniprot Q9ZN18
    3. 2538014Species Porphyromonas gingivalis [TaxId:837] [143808] (1 PDB entry)
      Uniprot Q7MXM8 3-341
  3. 2538016automated matches [190353] (3 species)
    not a true protein
    1. 2538017Species Enterococcus faecalis [311217] (1 PDB entry)
    2. 2538026Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [187181] (3 PDB entries)
    3. 3066509Species Medicago truncatula [TaxId:3880] [366571] (2 PDB entries)

More info for Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase

Timeline for Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase: