Lineage for d1thda1 (1thd A:298-395)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2032114Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2032497Family b.1.18.4: Class II viral fusion proteins C-terminal domain [81284] (3 protein domains)
  6. 2032498Protein Envelope glycoprotein [49213] (5 species)
  7. 2032499Species Dengue virus type 2 [TaxId:11060] [89194] (10 PDB entries)
    Uniprot P12823 281-675 # 99% sequence identity
  8. 2032510Domain d1thda1: 1thd A:298-395 [106910]
    Other proteins in same PDB: d1thda2, d1thdb2, d1thdc2

Details for d1thda1

PDB Entry: 1thd (more details), 9.5 Å

PDB Description: complex organization of dengue virus e protein as revealed by 9.5 angstrom cryo-em reconstruction
PDB Compounds: (A:) major envelope protein E

SCOPe Domain Sequences for d1thda1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1thda1 b.1.18.4 (A:298-395) Envelope glycoprotein {Dengue virus type 2 [TaxId: 11060]}
sysmctgkfkvvkeiaetqhgtivirvqyegdgspckipfeimdlekrhvlgrlitvnpi
vtekdspvnieaeppfgdsyiiigvepgqlkldwfkkg

SCOPe Domain Coordinates for d1thda1:

Click to download the PDB-style file with coordinates for d1thda1.
(The format of our PDB-style files is described here.)

Timeline for d1thda1: