SCOPe 2.06: Protein: Bacterial aa3 type cytochrome c oxidase subunit II

Lineage for Protein: Bacterial aa3 type cytochrome c oxidase subunit II

Root: SCOPe 2.06
Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
Fold f.17: Transmembrane helix hairpin [81334] (6 superfamilies)
two antiparallel transmembrane helices
Superfamily f.17.2: Cytochrome c oxidase subunit II-like, transmembrane region [81464] (2 families)
Family f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region [81463] (5 proteins)
Protein Bacterial aa3 type cytochrome c oxidase subunit II [81458] (2 species)

Species:

Paracoccus denitrificans [TaxId:266] [81456] (4 PDB entries)
1. Domain for 1ar1:
  - Domain d1ar1b2: 1ar1 B:1-107 [43619]
    Other proteins in same PDB: d1ar1a_, d1ar1b1, d1ar1c_, d1ar1d_
    complexed with ca, cu, hea, lda, mg
2. Domain for 1qle:
  - Domain d1qleb2: 1qle B:1-107 [43621]
    Other proteins in same PDB: d1qlea_, d1qleb1, d1qlec_, d1qled_, d1qleh_, d1qlel_
    complexed with ca, cu, cua, hea, mn, pc1
3. Domain for 3ehb:
  - Domain d3ehbb2: 3ehb B:1-107 [158151]
    Other proteins in same PDB: d3ehba_, d3ehbb1, d3ehbc_, d3ehbd_
    automated match to d1ar1b2
    complexed with ca, cu, hea, lda, lmt, mg, per; mutant
4. Domain for 3hb3:
  - Domain d3hb3b1: 3hb3 B:1-107 [199493]
    Other proteins in same PDB: d3hb3a_, d3hb3b2, d3hb3c_, d3hb3d_
    automated match to d1ar1b2
    complexed with ca, cu1, hea, lda, lmt, mn, peo

Rhodobacter sphaeroides [TaxId:1063] [81457] (6 PDB entries)

Domains for 1m56:
1. Domain d1m56b2: 1m56 B:30-129 [74473]
  Other proteins in same PDB: d1m56a_, d1m56b1, d1m56c_, d1m56d_, d1m56g_, d1m56h1, d1m56i_, d1m56j_
  complexed with ca, cu, hea, mg, peh
2. Domain d1m56h2: 1m56 H:30-129 [74478]
  Other proteins in same PDB: d1m56a_, d1m56b1, d1m56c_, d1m56d_, d1m56g_, d1m56h1, d1m56i_, d1m56j_
  complexed with ca, cu, hea, mg, peh
Domains for 1m57:
1. Domain d1m57b2: 1m57 B:30-129 [74483]
  Other proteins in same PDB: d1m57a_, d1m57b1, d1m57c_, d1m57d_, d1m57g_, d1m57h1, d1m57i_, d1m57j_
  complexed with ca, cu, hea, mg, peh; mutant
2. Domain d1m57h2: 1m57 H:30-129 [74488]
  Other proteins in same PDB: d1m57a_, d1m57b1, d1m57c_, d1m57d_, d1m57g_, d1m57h1, d1m57i_, d1m57j_
  complexed with ca, cu, hea, mg, peh; mutant
Domains for 2gsm:
1. Domain d2gsmb2: 2gsm B:30-129 [135591]
  Other proteins in same PDB: d2gsma_, d2gsmb1, d2gsmb3, d2gsmc_, d2gsmd1, d2gsmd3
  automated match to d3fyeb1
  complexed with ca, cd, cu, dmu, hea, mg, oh, trd
2. Domain d2gsmd2: 2gsm D:30-129 [135594]
  Other proteins in same PDB: d2gsma_, d2gsmb1, d2gsmb3, d2gsmc_, d2gsmd1, d2gsmd3
  automated match to d3fyeb1
  complexed with ca, cd, cu, dmu, hea, mg, oh, trd

Domains for 3dtu:

Domain d3dtub2: 3dtu B:29-129 [157858]
Other proteins in same PDB: d3dtua_, d3dtub1, d3dtub3, d3dtuc_, d3dtud1, d3dtud3
automated match to d3fyeb1
complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd

Domain d3dtud2: 3dtu D:28-129 [157861]
Other proteins in same PDB: d3dtua_, d3dtub1, d3dtub3, d3dtuc_, d3dtud1, d3dtud3
automated match to d3fyeb1
complexed with ca, cd, cu, dmu, dxc, hea, hto, mg, oh, po4, trd

Domains for 3fye:

Domain d3fyeb1: 3fye B:30-129 [232210]
Other proteins in same PDB: d3fyea_, d3fyeb2, d3fyeb3, d3fyec_, d3fyed2, d3fyed3
automated match to d3dtub2
complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx

Domain d3fyed1: 3fye D:30-129 [239279]
Other proteins in same PDB: d3fyea_, d3fyeb2, d3fyeb3, d3fyec_, d3fyed2, d3fyed3
automated match to d3fyeb1
complexed with ca, cd, cu1, dmu, hea, hto, mg, trd, unx

Domains for 3fyi:

Domain d3fyib1: 3fyi B:30-129 [239281]
Other proteins in same PDB: d3fyia_, d3fyib2, d3fyib3, d3fyic_, d3fyid2, d3fyid3
automated match to d3fyeb1
complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd

Domain d3fyid1: 3fyi D:30-129 [239283]
Other proteins in same PDB: d3fyia_, d3fyib2, d3fyib3, d3fyic_, d3fyid2, d3fyid3
automated match to d3fyeb1
complexed with ca, cd, cu1, cyn, dmu, hea, hto, mg, trd

More info for Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region

Timeline for Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region:

Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region first appeared in SCOP 1.63
Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region appears in SCOPe 2.05
Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region appears in SCOPe 2.07
Protein Bacterial aa3 type cytochrome c oxidase subunit II from f.17.2.1: Cytochrome c oxidase subunit II-like, transmembrane region appears in the current release, SCOPe 2.08