Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily) core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta |
Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families) Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues |
Family d.185.1.1: MPP-like [63412] (7 proteins) Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal |
Cytochrome bc1 core subunit 1 [63408] (3 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64304] (7 PDB entries) |
Species Chicken (Gallus gallus) [TaxId:9031] [55998] (3 PDB entries) |
Species Cow (Bos taurus) [TaxId:9913] [55997] (19 PDB entries) Uniprot P31800 |
Cytochrome bc1 core subunit 2 [63409] (4 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64305] (7 PDB entries) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [384430] (1 PDB entry) |
Species Chicken (Gallus gallus) [TaxId:9031] [56001] (3 PDB entries) |
Species Cow (Bos taurus) [TaxId:9913] [56000] (19 PDB entries) Uniprot P23004 |
Mitochondrial processing peptidase (MPP) alpha chain [64302] (1 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64303] (4 PDB entries) |
Mitochondrial processing peptidase (MPP) beta chain [64300] (1 species) |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64301] (4 PDB entries) |
Presequence protease 1, PREP1 [143498] (1 species) duplication: comprises four domains of this fold; similar to the MPP alpha-beta heterodimer |
Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [143499] (1 PDB entry) Uniprot Q9LJL3 100-356! Uniprot Q9LJL3 357-624! Uniprot Q9LJL3 625-882! Uniprot Q9LJL3 883-1078 |
Protease III [143500] (1 species) duplication: comprises four domains of this fold |
Species Escherichia coli [TaxId:562] [143501] (1 PDB entry) Uniprot P05458 24-263! Uniprot P05458 264-503! Uniprot P05458 504-732! Uniprot P05458 733-960 |
automated matches [254430] (2 species) not a true protein |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [257462] (3 PDB entries) |
Species Cow (Bos taurus) [TaxId:9913] [254891] (2 PDB entries) |
Timeline for Family d.185.1.1: MPP-like: