Lineage for Family d.185.1.1: MPP-like

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2562006Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. 2562007Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families) (S)
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
  5. 2562008Family d.185.1.1: MPP-like [63412] (7 proteins)
    Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal

Proteins:

  1. 2562009Cytochrome bc1 core subunit 1 [63408] (3 species)
    1. 2562010Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64304] (7 PDB entries)
    2. 2562031Species Chicken (Gallus gallus) [TaxId:9031] [55998] (3 PDB entries)
    3. 2562038Species Cow (Bos taurus) [TaxId:9913] [55997] (18 PDB entries)
      Uniprot P31800
  2. 2562083Cytochrome bc1 core subunit 2 [63409] (3 species)
    1. 2562084Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64305] (7 PDB entries)
    2. 2562105Species Chicken (Gallus gallus) [TaxId:9031] [56001] (3 PDB entries)
    3. 2562112Species Cow (Bos taurus) [TaxId:9913] [56000] (18 PDB entries)
      Uniprot P23004
  3. 2562157Mitochondrial processing peptidase (MPP) alpha chain [64302] (1 species)
  4. 2562191Mitochondrial processing peptidase (MPP) beta chain [64300] (1 species)
  5. 2562225Presequence protease 1, PREP1 [143498] (1 species)
    duplication: comprises four domains of this fold; similar to the MPP alpha-beta heterodimer
  6. 2562235Protease III [143500] (1 species)
    duplication: comprises four domains of this fold
  7. 2562241automated matches [254430] (2 species)
    not a true protein
    1. 2562242Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [257462] (1 PDB entry)
    2. 2562247Species Cow (Bos taurus) [TaxId:9913] [254891] (2 PDB entries)

More info for Family d.185.1.1: MPP-like

Timeline for Family d.185.1.1: MPP-like: