Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2562006Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. 2562007Superfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families) (S)
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
  5. 2562008Family d.185.1.1: MPP-like [63412] (7 proteins)
    Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal
  6. 2562241Protein automated matches [254430] (2 species)
    not a true protein

Species:

  1. 2562242Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [257462] (1 PDB entry)
  2. 2562247Cow (Bos taurus) [TaxId:9913] [254891] (2 PDB entries)
    1. Domains for 1sqq:
      1. 2562248Domain d1sqqa1: 1sqq A:1-233 [119007]
        Other proteins in same PDB: d1sqqb2, d1sqqc1, d1sqqc2, d1sqqd1, d1sqqd2, d1sqqe1, d1sqqe2, d1sqqf1, d1sqqg_, d1sqqh_, d1sqqi_, d1sqqj_, d1sqqk1
        automated match to d2a06a1
        complexed with fes, hem, ost, uq2
      2. 2562249Domain d1sqqa2: 1sqq A:234-446 [119008]
        Other proteins in same PDB: d1sqqb2, d1sqqc1, d1sqqc2, d1sqqd1, d1sqqd2, d1sqqe1, d1sqqe2, d1sqqf1, d1sqqg_, d1sqqh_, d1sqqi_, d1sqqj_, d1sqqk1
        automated match to d2fyua2
        complexed with fes, hem, ost, uq2
      3. 2562250Domain d1sqqb1: 1sqq B:17-235 [119009]
        Other proteins in same PDB: d1sqqb2, d1sqqc1, d1sqqc2, d1sqqd1, d1sqqd2, d1sqqe1, d1sqqe2, d1sqqf1, d1sqqg_, d1sqqh_, d1sqqi_, d1sqqj_, d1sqqk1
        automated match to d1bccb1
        complexed with fes, hem, ost, uq2
    2. Domains for 5okd:
      1. 3047147Domain d5okda1: 5okd A:2-233 [347209]
        Other proteins in same PDB: d5okdb2, d5okdc1, d5okdc2, d5okdd1, d5okdd2, d5okde1, d5okde2, d5okdg_, d5okdh_, d5okdi_, d5okdj_
        automated match to d2a06a1
        complexed with 6pe, 9xe, cdl, fes, hec, hem, lmt, pee, pg4, po4, px4
      2. 3047148Domain d5okda2: 5okd A:234-446 [347210]
        Other proteins in same PDB: d5okdb2, d5okdc1, d5okdc2, d5okdd1, d5okdd2, d5okde1, d5okde2, d5okdg_, d5okdh_, d5okdi_, d5okdj_
        automated match to d2fyua2
        complexed with 6pe, 9xe, cdl, fes, hec, hem, lmt, pee, pg4, po4, px4
      3. 3047158Domain d5okdb1: 5okd B:20-235 [347220]
        Other proteins in same PDB: d5okdb2, d5okdc1, d5okdc2, d5okdd1, d5okdd2, d5okde1, d5okde2, d5okdg_, d5okdh_, d5okdi_, d5okdj_
        automated match to d1bccb1
        complexed with 6pe, 9xe, cdl, fes, hec, hem, lmt, pee, pg4, po4, px4

More info for Protein automated matches from d.185.1.1: MPP-like

Timeline for Protein automated matches from d.185.1.1: MPP-like: