Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
- Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds) 
Fold d.185: LuxS/MPP-like metallohydrolase [63410] (1 superfamily)
core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/betaSuperfamily d.185.1: LuxS/MPP-like metallohydrolase [63411] (3 families) 
Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
Family d.185.1.1: MPP-like [63412] (7 proteins)
Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal
Protein Presequence protease 1, PREP1 [143498] (1 species)
duplication: comprises four domains of this fold; similar to the MPP alpha-beta heterodimerSpecies Thale cress (Arabidopsis thaliana) [TaxId:3702] [143499] (1 PDB entry)
Uniprot Q9LJL3 100-356! Uniprot Q9LJL3 357-624! Uniprot Q9LJL3 625-882! Uniprot Q9LJL3 883-1078
PDB entry in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:
- Domain(s) for 2fge:
Domain d2fgea1: 2fge A:540-797 [133430]
complexed with cl, mg, zn
Domain d2fgea2: 2fge A:798-993 [133431]
complexed with cl, mg, zn
Domain d2fgea3: 2fge A:272-539 [133432]
complexed with cl, mg, zn
Domain d2fgea4: 2fge A:15-271 [133433]
complexed with cl, mg, zn
Domain d2fgeb1: 2fge B:540-797 [133434]
automated match to d2fgea1
complexed with cl, mg, zn
Domain d2fgeb2: 2fge B:798-993 [133435]
automated match to d2fgea2
complexed with cl, mg, zn
Domain d2fgeb3: 2fge B:272-539 [133436]
automated match to d2fgea3
complexed with cl, mg, zn
Domain d2fgeb4: 2fge B:15-271 [133437]
automated match to d2fgea4
complexed with cl, mg, zn
More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.185.1.1 Presequence protease 1, PREP1
Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.185.1.1 Presequence protease 1, PREP1:
- Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.185.1.1 Presequence protease 1, PREP1 first appeared in SCOP 1.73
- Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.185.1.1 Presequence protease 1, PREP1 appears in SCOPe 2.07