SCOP 1.67: Protein: RBP9 subunit of RNA polymerase II

Lineage for Protein: RBP9 subunit of RNA polymerase II

Root: SCOP 1.67
Class g: Small proteins [56992] (72 folds)
Fold g.41: Rubredoxin-like [57769] (13 superfamilies)
metal(zinc or iron)-bound fold; sequence contains two CX(n)C motifs, in most cases n = 2
Superfamily g.41.3: Zinc beta-ribbon [57783] (3 families)
Family g.41.3.1: Transcriptional factor domain [57784] (3 proteins)
Protein RBP9 subunit of RNA polymerase II [57787] (2 species)
contains two differently decorated domains of this fold

Species:

Archaeon Thermococcus celer [TaxId:2264] [57788] (1 PDB entry)
- Domain for 1qyp:
  - Domain d1qyp__: 1qyp - [45205]
    C-terminal domain
    complexed with zn
Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64575] (4 PDB entries)
1. Domains for 1i3q:
  1. Domain d1i3qi1: 1i3q I:1-49 [61615]
    Other proteins in same PDB: d1i3qa_, d1i3qb_, d1i3qc1, d1i3qc2, d1i3qe1, d1i3qe2, d1i3qf_, d1i3qh_, d1i3qj_, d1i3qk_, d1i3ql_
  2. Domain d1i3qi2: 1i3q I:50-122 [61616]
    Other proteins in same PDB: d1i3qa_, d1i3qb_, d1i3qc1, d1i3qc2, d1i3qe1, d1i3qe2, d1i3qf_, d1i3qh_, d1i3qj_, d1i3qk_, d1i3ql_
    complexed with mg, zn
2. Domains for 1i50:
  1. Domain d1i50i1: 1i50 I:1-49 [61762]
    Other proteins in same PDB: d1i50a_, d1i50b_, d1i50c1, d1i50c2, d1i50e1, d1i50e2, d1i50f_, d1i50h_, d1i50j_, d1i50k_, d1i50l_
  2. Domain d1i50i2: 1i50 I:50-122 [61763]
    Other proteins in same PDB: d1i50a_, d1i50b_, d1i50c1, d1i50c2, d1i50e1, d1i50e2, d1i50f_, d1i50h_, d1i50j_, d1i50k_, d1i50l_
    complexed with mn, zn
3. Domains for 1i6h:
  1. Domain d1i6hi1: 1i6h I:2-49 [61839]
    Other proteins in same PDB: d1i6ha_, d1i6hb_, d1i6hc1, d1i6hc2, d1i6he1, d1i6he2, d1i6hf_, d1i6hh_, d1i6hj_, d1i6hk_, d1i6hl_
  2. Domain d1i6hi2: 1i6h I:50-120 [61840]
    Other proteins in same PDB: d1i6ha_, d1i6hb_, d1i6hc1, d1i6hc2, d1i6he1, d1i6he2, d1i6hf_, d1i6hh_, d1i6hj_, d1i6hk_, d1i6hl_
    complexed with mg, zn
4. Domains for 1k83:
  1. Domain d1k83i1: 1k83 I:1-49 [68283]
    Other proteins in same PDB: d1k83a_, d1k83b_, d1k83c1, d1k83c2, d1k83e1, d1k83e2, d1k83f_, d1k83h_, d1k83j_, d1k83k_, d1k83l_
  2. Domain d1k83i2: 1k83 I:50-122 [68284]
    Other proteins in same PDB: d1k83a_, d1k83b_, d1k83c1, d1k83c2, d1k83e1, d1k83e2, d1k83f_, d1k83h_, d1k83j_, d1k83k_, d1k83l_
    complexed with ilx, mn, trx, zn

More info for Protein RBP9 subunit of RNA polymerase II from g.41.3.1: Transcriptional factor domain

Timeline for Protein RBP9 subunit of RNA polymerase II from g.41.3.1: Transcriptional factor domain:

Protein RBP9 subunit of RNA polymerase II from g.41.3.1: Transcriptional factor domain first appeared (with stable ids) in SCOP 1.55, called Protein Rbp9 subunit of RNA polymerase II, C-terminal domain from g.41.3.1: Transcriptional factor domain
Protein RBP9 subunit of RNA polymerase II from g.41.3.1: Transcriptional factor domain appears in SCOP 1.65
Protein RBP9 subunit of RNA polymerase II from g.41.3.1: Transcriptional factor domain appears in SCOP 1.69
Protein RBP9 subunit of RNA polymerase II from g.41.3.1: Transcriptional factor domain appears in the current release, SCOPe 2.08