Lineage for Species: Simian immunodeficiency virus [TaxId: 11723]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2305222Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2309001Superfamily a.4.10: N-terminal Zn binding domain of HIV integrase [46919] (2 families) (S)
  5. 2309029Family a.4.10.0: automated matches [380158] (1 protein)
    not a true family
  6. 2309030Protein automated matches [380159] (1 species)
    not a true protein
  7. 2309031Species Simian immunodeficiency virus [TaxId:11723] [380160] (3 PDB entries)

PDB entries in Species: Simian immunodeficiency virus [TaxId: 11723]:

  1. Domain(s) for 6rwm:
    1. 2309032Domain d6rwmc1: 6rwm C:4-43 [380225]
      Other proteins in same PDB: d6rwmc2, d6rwmd1, d6rwmd2, d6rwme2, d6rwmf1, d6rwmk2, d6rwml1, d6rwml2, d6rwmm2, d6rwmn1
      automated match to d1k6ya1
      protein/DNA complex; complexed with cl, klq, mg, zn
    2. 2309033Domain d6rwme1: 6rwm E:1-46 [380209]
      Other proteins in same PDB: d6rwmc2, d6rwmd1, d6rwmd2, d6rwme2, d6rwmf1, d6rwmk2, d6rwml1, d6rwml2, d6rwmm2, d6rwmn1
      automated match to d1wjba_
      protein/DNA complex; complexed with cl, klq, mg, zn
    3. 2309034Domain d6rwmk1: 6rwm K:4-43 [380228]
      Other proteins in same PDB: d6rwmc2, d6rwmd1, d6rwmd2, d6rwme2, d6rwmf1, d6rwmk2, d6rwml1, d6rwml2, d6rwmm2, d6rwmn1
      automated match to d1k6ya1
      protein/DNA complex; complexed with cl, klq, mg, zn
    4. 2309035Domain d6rwmm1: 6rwm M:1-46 [380194]
      Other proteins in same PDB: d6rwmc2, d6rwmd1, d6rwmd2, d6rwme2, d6rwmf1, d6rwmk2, d6rwml1, d6rwml2, d6rwmm2, d6rwmn1
      automated match to d1wjba_
      protein/DNA complex; complexed with cl, klq, mg, zn
  2. Domain(s) for 6rwn:
    1. 2309040Domain d6rwnc1: 6rwn C:4-43 [380191]
      Other proteins in same PDB: d6rwnc2, d6rwnd1, d6rwnd2, d6rwne2, d6rwnf1, d6rwnk2, d6rwnl1, d6rwnl2, d6rwnm2, d6rwnn1
      automated match to d1k6ya1
      protein/DNA complex; complexed with cl, dlu, mg, zn
    2. 2309041Domain d6rwne1: 6rwn E:1-46 [380182]
      Other proteins in same PDB: d6rwnc2, d6rwnd1, d6rwnd2, d6rwne2, d6rwnf1, d6rwnk2, d6rwnl1, d6rwnl2, d6rwnm2, d6rwnn1
      automated match to d1wjba_
      protein/DNA complex; complexed with cl, dlu, mg, zn
    3. 2309042Domain d6rwnk1: 6rwn K:4-43 [380294]
      Other proteins in same PDB: d6rwnc2, d6rwnd1, d6rwnd2, d6rwne2, d6rwnf1, d6rwnk2, d6rwnl1, d6rwnl2, d6rwnm2, d6rwnn1
      automated match to d1k6ya1
      protein/DNA complex; complexed with cl, dlu, mg, zn
    4. 2309043Domain d6rwnm1: 6rwn M:1-46 [380180]
      Other proteins in same PDB: d6rwnc2, d6rwnd1, d6rwnd2, d6rwne2, d6rwnf1, d6rwnk2, d6rwnl1, d6rwnl2, d6rwnm2, d6rwnn1
      automated match to d1wjba_
      protein/DNA complex; complexed with cl, dlu, mg, zn
  3. Domain(s) for 6rwo:
    1. 2309036Domain d6rwoc1: 6rwo C:4-43 [380161]
      Other proteins in same PDB: d6rwoc2, d6rwod1, d6rwod2, d6rwoe2, d6rwof1, d6rwok2, d6rwol1, d6rwol2, d6rwom2, d6rwon1
      automated match to d1k6ya1
      protein/DNA complex; complexed with cl, klq, mg, zn
    2. 2309037Domain d6rwoe1: 6rwo E:1-46 [380168]
      Other proteins in same PDB: d6rwoc2, d6rwod1, d6rwod2, d6rwoe2, d6rwof1, d6rwok2, d6rwol1, d6rwol2, d6rwom2, d6rwon1
      automated match to d1wjba_
      protein/DNA complex; complexed with cl, klq, mg, zn
    3. 2309038Domain d6rwok1: 6rwo K:4-43 [380211]
      Other proteins in same PDB: d6rwoc2, d6rwod1, d6rwod2, d6rwoe2, d6rwof1, d6rwok2, d6rwol1, d6rwol2, d6rwom2, d6rwon1
      automated match to d1k6ya1
      protein/DNA complex; complexed with cl, klq, mg, zn
    4. 2309039Domain d6rwom1: 6rwo M:1-46 [380200]
      Other proteins in same PDB: d6rwoc2, d6rwod1, d6rwod2, d6rwoe2, d6rwof1, d6rwok2, d6rwol1, d6rwol2, d6rwom2, d6rwon1
      automated match to d1wjba_
      protein/DNA complex; complexed with cl, klq, mg, zn

More info for Species Simian immunodeficiency virus [TaxId:11723] from a.4.10.0 automated matches

Timeline for Species Simian immunodeficiency virus [TaxId:11723] from a.4.10.0 automated matches:

  • Species Simian immunodeficiency virus [TaxId:11723] from a.4.10.0 automated matches is new in SCOPe 2.07-stable
  • Species Simian immunodeficiency virus [TaxId:11723] from a.4.10.0 automated matches does not appear in SCOPe 2.08