SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for d5gthi_ (5gth I:)

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2226297Fold f.23: Single transmembrane helix [81407] (42 superfamilies)
    not a true fold
  4. 2227432Superfamily f.23.37: Photosystem II reaction center protein I, PsbI [161041] (1 family) (S)
    automatically mapped to Pfam PF02532
  5. 2227433Family f.23.37.1: PsbI-like [161042] (1 protein)
    Pfam PF02532
  6. 2227434Protein Photosystem II reaction center protein I, PsbI [161043] (3 species)
  7. 2227440Species Thermosynechococcus vulcanus [TaxId:32053] [224950] (9 PDB entries)
  8. 2288273Domain d5gthi_: 5gth I: [331574]
    Other proteins in same PDB: d5gthf_, d5gthv_, d5gthz_
    automated match to d4ub8i_
    complexed with bcr, bct, ca, cl, cla, dgd, fe2, gol, hem, htg, lhg, lmg, lmt, mg, oex, pho, pl9, sqd, unl

Details for d5gthi_

PDB Entry: 5gth (more details), 2.5 Å

PDB Description: native xfel structure of photosystem ii (dark dataset)
PDB Compounds: (I:) Photosystem II reaction center protein I

SCOPe Domain Sequences for d5gthi_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5gthi_ f.23.37.1 (I:) Photosystem II reaction center protein I, PsbI {Thermosynechococcus vulcanus [TaxId: 32053]}
metlkitvyivvtffvllfvfgflsgdparnpkrkdle

SCOPe Domain Coordinates for d5gthi_:

Click to download the PDB-style file with coordinates for d5gthi_.
(The format of our PDB-style files is described here.)

Timeline for d5gthi_:

  • d5gthi_ appears in periodic updates to SCOPe 2.06 starting on 2017-03-17