Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1681419Fold d.166: ADP-ribosylation [56398] (1 superfamily)
    unusual fold
  4. 1681420Superfamily d.166.1: ADP-ribosylation [56399] (8 families) (S)
  5. 1681691Family d.166.1.0: automated matches [191650] (1 protein)
    not a true family
  6. 1681692Protein automated matches [191197] (6 species)
    not a true protein

Species:

  1. 1681693Clostridium botulinum [TaxId:1491] [230888] (3 PDB entries)
    1. Domains for 2j3v:
      1. 1681696Domain d2j3va1: 2j3v A:2-217 [242184]
        automated match to d2j3za1
        complexed with gol, so4
      2. 1681697Domain d2j3va2: 2j3v A:218-431 [242185]
        automated match to d2j3za2
        complexed with gol, so4
    2. Domains for 2j3x:
      1. 1681694Domain d2j3xa1: 2j3x A:2-217 [242186]
        automated match to d2j3za1
        complexed with gol, so4
      2. 1681695Domain d2j3xa2: 2j3x A:218-431 [242187]
        automated match to d2j3za2
        complexed with gol, so4
    3. Domains for 2j3z:
      1. 1681698Domain d2j3za1: 2j3z A:2-217 [230889]
        automated match to d1giqa1
        complexed with co, gol, so4
      2. 1681699Domain d2j3za2: 2j3z A:218-431 [230890]
        automated match to d1giqa2
        complexed with co, gol, so4
      3. 1681700Domain d2j3zb1: 2j3z B:2-217 [230891]
        automated match to d1giqa1
        complexed with co, gol, so4
      4. 1681701Domain d2j3zb2: 2j3z B:218-431 [230892]
        automated match to d1giqa2
        complexed with co, gol, so4
      5. 1681702Domain d2j3zc1: 2j3z C:2-217 [230893]
        automated match to d1giqa1
        complexed with co, gol, so4
      6. 1681703Domain d2j3zc2: 2j3z C:218-429 [230894]
        automated match to d1giqa2
        complexed with co, gol, so4
      7. 1681704Domain d2j3zd1: 2j3z D:6-217 [230895]
        automated match to d1giqa1
        complexed with co, gol, so4
      8. 1681705Domain d2j3zd2: 2j3z D:218-426 [230896]
        automated match to d1giqa2
        complexed with co, gol, so4
      9. 1681706Domain d2j3ze1: 2j3z E:6-217 [230897]
        automated match to d1giqa1
        complexed with co, gol, so4
      10. 1681707Domain d2j3zf1: 2j3z F:6-217 [238697]
        automated match to d2j3za1
        complexed with co, gol, so4
      11. 1681708Domain d2j3zf2: 2j3z F:218-426 [238698]
        automated match to d2j3za2
        complexed with co, gol, so4
  2. 1681709Clostridium difficile [TaxId:1496] [231449] (5 PDB entries)
    1. Domains for 2wn4:
      1. 1681710Domain d2wn4a1: 2wn4 A:28-216 [231450]
        automated match to d1giqa1
      2. 1681711Domain d2wn4a2: 2wn4 A:217-420 [231451]
        automated match to d1giqa2
    2. Domains for 2wn5:
      1. 1681712Domain d2wn5a1: 2wn5 A:24-216 [231456]
        automated match to d1giqa1
      2. 1681713Domain d2wn5a2: 2wn5 A:217-420 [231457]
        automated match to d1giqa2
    3. Domains for 2wn6:
      1. 1681714Domain d2wn6a1: 2wn6 A:17-216 [231452]
        automated match to d1giqa1
        complexed with gol, ndp
      2. 1681715Domain d2wn6a2: 2wn6 A:217-420 [231455]
        automated match to d1giqa2
        complexed with gol, ndp
    4. Domains for 2wn7:
      1. 1681718Domain d2wn7a1: 2wn7 A:27-216 [231453]
        automated match to d1giqa1
        complexed with gol, nad
      2. 1681719Domain d2wn7a2: 2wn7 A:217-420 [231454]
        automated match to d1giqa2
        complexed with gol, nad
    5. Domains for 2wn8:
      1. 1681716Domain d2wn8a1: 2wn8 A:25-216 [231458]
        automated match to d1giqa1
      2. 1681717Domain d2wn8a2: 2wn8 A:217-420 [231459]
        automated match to d1giqa2
  3. 1681720Corynebacterium diphtheriae [TaxId:1717] [256176] (2 PDB entries)
    1. Domain for 4ae0:
    2. Domains for 4ae1:
      1. 1681722Domain d4ae1a1: 4ae1 A:1-187 [251011]
        Other proteins in same PDB: d4ae1a2, d4ae1a3, d4ae1b2, d4ae1b3
        automated match to d1f0la2
        complexed with nca; mutant
      2. 1681723Domain d4ae1b1: 4ae1 B:3-187 [251014]
        Other proteins in same PDB: d4ae1a2, d4ae1a3, d4ae1b2, d4ae1b3
        automated match to d1f0la2
        complexed with nca; mutant
  4. 1681724Human (Homo sapiens) [TaxId:9606] [225406] (21 PDB entries)
    1. Domains for 1wok:
      1. 1681757Domain d1woka2: 1wok A:797-1011 [121117]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
      2. 1681758Domain d1wokb2: 1wok B:797-1011 [121119]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
      3. 1681759Domain d1wokc2: 1wok C:797-1011 [121121]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
      4. 1681760Domain d1wokd2: 1wok D:797-1011 [121123]
        Other proteins in same PDB: d1woka1, d1wokb1, d1wokc1, d1wokd1
        automated match to d4hhyd2
        complexed with cnq
    2. Domain for 3c49:
    3. Domain for 3c4h:
    4. Domain for 3ce0:
    5. Domain for 3fhb:
    6. Domain for 4gv0:
    7. Domain for 4gv2:
    8. Domain for 4gv4:
    9. Domains for 4gv7:
      1. 1681752Domain d4gv7a2: 4gv7 A:797-1010 [222197]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      2. 1681753Domain d4gv7b2: 4gv7 B:797-1010 [222199]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      3. 1681754Domain d4gv7c2: 4gv7 C:797-1010 [222201]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
      4. 1681755Domain d4gv7d2: 4gv7 D:797-1010 [222203]
        Other proteins in same PDB: d4gv7a1, d4gv7b1, d4gv7c1, d4gv7d1
        automated match to d1gs0a2
        complexed with mew
    10. Domains for 4hhy:
      1. 1681742Domain d4hhya2: 4hhy A:136-349 [222603]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      2. 1681743Domain d4hhyb2: 4hhy B:136-349 [222605]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      3. 1681744Domain d4hhyc2: 4hhy C:136-350 [222607]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
      4. 1681745Domain d4hhyd2: 4hhy D:136-343 [222609]
        Other proteins in same PDB: d4hhya1, d4hhyb1, d4hhyc1, d4hhyd1
        automated match to d1gs0a2
        complexed with 15r, peg, so4
    11. Domains for 4hhz:
      1. 1681748Domain d4hhza2: 4hhz A:136-349 [222611]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      2. 1681749Domain d4hhzb2: 4hhz B:136-350 [222613]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      3. 1681750Domain d4hhzc2: 4hhz C:136-350 [222615]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
      4. 1681751Domain d4hhzd2: 4hhz D:136-349 [222617]
        Other proteins in same PDB: d4hhza1, d4hhzb1, d4hhzc1, d4hhzd1
        automated match to d1gs0a2
        complexed with 15s, so4
    12. Domains for 4l6s:
      1. 1681730Domain d4l6sa2: 4l6s A:797-1011 [224570]
        Other proteins in same PDB: d4l6sa1, d4l6sb1
        automated match to d1gs0a2
        protein/DNA complex; complexed with 1wq
      2. 1681731Domain d4l6sb2: 4l6s B:797-1011 [224572]
        Other proteins in same PDB: d4l6sa1, d4l6sb1
        automated match to d1gs0a2
        protein/DNA complex; complexed with 1wq
    13. Domain for 4l6z:
    14. Domain for 4l70:
    15. Domain for 4l7l:
    16. Domain for 4l7n:
    17. Domain for 4l7o:
    18. Domain for 4l7p:
    19. Domain for 4l7r:
    20. Domain for 4l7u:
    21. Domains for 4pjt:
      1. 1681739Domain d4pjta2: 4pjt A:797-1010 [259935]
        Other proteins in same PDB: d4pjta1, d4pjtc1, d4pjtd1
        automated match to d4hhyd2
        complexed with 2yq, gol, so4
      2. 1681740Domain d4pjtc2: 4pjt C:797-1010 [259939]
        Other proteins in same PDB: d4pjta1, d4pjtc1, d4pjtd1
        automated match to d4hhyd2
        complexed with 2yq, gol, so4
      3. 1681741Domain d4pjtd2: 4pjt D:797-1009 [259941]
        Other proteins in same PDB: d4pjta1, d4pjtc1, d4pjtd1
        automated match to d4hhyd2
        complexed with 2yq, gol, so4
  5. 1681761Salmonella enterica [TaxId:90370] [226726] (1 PDB entry)
  6. 1681763Vibrio cholerae [TaxId:666] [189511] (11 PDB entries)
    1. Domain for 2q6m:
    2. Domain for 3ess:
    3. Domain for 3ki0:
    4. Domain for 3ki1:
    5. Domain for 3ki2:
    6. Domain for 3ki3:
    7. Domain for 3ki4:
    8. Domain for 3ki5:
    9. Domain for 3ki6:
    10. Domain for 3ki7:
    11. Domain for 3ny6:

More info for Protein automated matches from d.166.1.0: automated matches

Timeline for Protein automated matches from d.166.1.0: automated matches: