SCOPe 2.07: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
division into families based on beta-sheet topologies
Family c.37.1.12: ABC transporter ATPase domain-like [52686] (25 proteins)
there are two additional subdomains inserted into the central core that has a RecA-like topology
Protein automated matches [190723] (8 species)
not a true protein

Species:

Archaeoglobus fulgidus [TaxId:2234] [255529] (1 PDB entry)
- Domains for 2onk:
  1. Domain d2onkb_: 2onk B: [148904]
    Other proteins in same PDB: d2onka1, d2onkc1, d2onkd1, d2onke1, d2onkh1, d2onki1, d2onkj2, d2onkj3
    automated match to d2onka1
    complexed with mg, po4, wo4
  2. Domain d2onkf_: 2onk F: [148908]
    Other proteins in same PDB: d2onka1, d2onkc1, d2onkd1, d2onke1, d2onkh1, d2onki1, d2onkj2, d2onkj3
    automated match to d2onka1
    complexed with mg, po4, wo4
  3. Domain d2onkg_: 2onk G: [148909]
    Other proteins in same PDB: d2onka1, d2onkc1, d2onkd1, d2onke1, d2onkh1, d2onki1, d2onkj2, d2onkj3
    automated match to d2onka1
    complexed with mg, po4, wo4
Escherichia coli K-12 [TaxId:83333] [233742] (1 PDB entry)
- Domains for 3tui:
  1. Domain d3tuic1: 3tui C:1-240 [239832]
    Other proteins in same PDB: d3tuia_, d3tuib_, d3tuic2, d3tuic3, d3tuid2, d3tuie_, d3tuif_, d3tuig2, d3tuih2, d3tuih3
    automated match to d3tuid1
    complexed with adp
  2. Domain d3tuid1: 3tui D:1-240 [233743]
    Other proteins in same PDB: d3tuia_, d3tuib_, d3tuic2, d3tuic3, d3tuid2, d3tuie_, d3tuif_, d3tuig2, d3tuih2, d3tuih3
    automated match to d3dhwc1
    complexed with adp
  3. Domain d3tuig1: 3tui G:1-240 [239834]
    Other proteins in same PDB: d3tuia_, d3tuib_, d3tuic2, d3tuic3, d3tuid2, d3tuie_, d3tuif_, d3tuig2, d3tuih2, d3tuih3
    automated match to d3tuid1
    complexed with adp
  4. Domain d3tuih1: 3tui H:1-240 [239836]
    Other proteins in same PDB: d3tuia_, d3tuib_, d3tuic2, d3tuic3, d3tuid2, d3tuie_, d3tuif_, d3tuig2, d3tuih2, d3tuih3
    automated match to d3tuid1
    complexed with adp
Escherichia coli [TaxId:83333] [261141] (1 PDB entry)
- Domains for 4r9u:
  1. Domain d4r9uc_: 4r9u C: [261142]
    Other proteins in same PDB: d4r9ua_, d4r9ub_
    automated match to d2qi9c_
    complexed with anp, lda, mg
  2. Domain d4r9ud_: 4r9u D: [261398]
    Other proteins in same PDB: d4r9ua_, d4r9ub_
    automated match to d2qi9c_
    complexed with anp, lda, mg
Methanocaldococcus jannaschii [TaxId:243232] [195767] (1 PDB entry)
- Domains for 3tif:
  1. Domain d3tifa_: 3tif A: [195769]
    automated match to d1l2tb_
    complexed with adp, ipa, na, pi
  2. Domain d3tifb_: 3tif B: [195768]
    automated match to d1l2tb_
    complexed with adp, ipa, na, pi
Methanosarcina acetivorans [TaxId:2214] [255793] (1 PDB entry)
- Domain for 3d31:
  - Domain d3d31b2: 3d31 B:1-229 [157264]
    Other proteins in same PDB: d3d31a1, d3d31a2, d3d31b1, d3d31c1, d3d31d1
    automated match to d3d31a2
    complexed with wo4
Norway rat (Rattus norvegicus) [TaxId:10116] [187882] (4 PDB entries)
1. Domains for 2ixe:
  1. Domain d2ixea_: 2ixe A: [165730]
    automated match to d1jj7a_
    complexed with atp, mg, po4; mutant
  2. Domain d2ixed_: 2ixe D: [165731]
    automated match to d1jj7a_
    complexed with atp, mg, po4; mutant
2. Domains for 2ixf:
  1. Domain d2ixfa_: 2ixf A: [165732]
    automated match to d1jj7a_
    complexed with atp, gol, mg; mutant
  2. Domain d2ixfb_: 2ixf B: [165733]
    automated match to d1jj7a_
    complexed with atp, gol, mg; mutant
  3. Domain d2ixfc_: 2ixf C: [165734]
    automated match to d1jj7a_
    complexed with atp, gol, mg; mutant
  4. Domain d2ixfd_: 2ixf D: [165735]
    automated match to d1jj7a_
    complexed with atp, gol, mg; mutant
3. Domain for 2ixg:
  - Domain d2ixga_: 2ixg A: [165736]
    automated match to d1jj7a_
    complexed with atp, gol; mutant
4. Domain for 4k8o:
  - Domain d4k8oa_: 4k8o A: [259358]
    automated match to d2ixfa_
    complexed with atp, cit, mg, ni; mutant
Pyrococcus horikoshii [TaxId:53953] [255107] (1 PDB entry)
- Domain for 2d62:
  - Domain d2d62a1: 2d62 A:1-243 [241506]
    Other proteins in same PDB: d2d62a2, d2d62a3
    automated match to d1g2912
    complexed with pop, so4
Streptococcus pneumoniae [TaxId:170187] [311250] (2 PDB entries)
1. Domain for 2wmg:
  - Domain d2wmga1: 2wmg A:35-425 [304587]
    Other proteins in same PDB: d2wmga2
    automated match to d2wmfa1
2. Domain for 2wmh:
  - Domain d2wmha1: 2wmh A:35-425 [304589]
    Other proteins in same PDB: d2wmha2
    automated match to d2wmfa1

More info for Protein automated matches from c.37.1.12: ABC transporter ATPase domain-like

Timeline for Protein automated matches from c.37.1.12: ABC transporter ATPase domain-like:

Protein automated matches from c.37.1.12: ABC transporter ATPase domain-like first appeared in SCOPe 2.01
Protein automated matches from c.37.1.12: ABC transporter ATPase domain-like appears in SCOPe 2.06
Protein automated matches from c.37.1.12: ABC transporter ATPase domain-like appears in the current release, SCOPe 2.08