Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1367719Fold c.45: (Phosphotyrosine protein) phosphatases II [52798] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 1423
  4. 1367720Superfamily c.45.1: (Phosphotyrosine protein) phosphatases II [52799] (6 families) (S)
    share with the family I the common active site structure with a circularly permuted topology
  5. 1368057Family c.45.1.0: automated matches [191381] (1 protein)
    not a true family
  6. 1368058Protein automated matches [190475] (5 species)
    not a true protein

Species:

  1. 1368059Chicken (Gallus gallus) [TaxId:9031] [193897] (1 PDB entry)
  2. 1368062Fruit fly (Drosophila melanogaster) [TaxId:7227] [226240] (2 PDB entries)
    1. Domains for 3s3e:
      1. 1368063Domain d3s3ea_: 3s3e A: [216190]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa
      2. 1368064Domain d3s3eb_: 3s3e B: [216191]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa
    2. Domains for 3s3f:
      1. 1368065Domain d3s3fa_: 3s3f A: [216192]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa, vo4
      2. 1368066Domain d3s3fb_: 3s3f B: [216193]
        automated match to d2h04a_
        complexed with 1bo, bu1, ipa, vo4
  3. 1368067Human (Homo sapiens) [TaxId:9606] [187400] (65 PDB entries)
    1. Domain for 1wrm:
    2. Domains for 1yz4:
      1. 1368140Domain d1yz4a_: 1yz4 A: [162339]
        automated match to d1m3ga_
        complexed with bog, so4
      2. 1368141Domain d1yz4b_: 1yz4 B: [162340]
        automated match to d1m3ga_
        complexed with bog, so4
    3. Domain for 1zc0:
    4. Domains for 1zzw:
      1. 1368074Domain d1zzwa_: 1zzw A: [162637]
        automated match to d1mkpa_
        complexed with edo, so4
      2. 1368075Domain d1zzwb_: 1zzw B: [162638]
        automated match to d1mkpa_
        complexed with edo, so4
    5. Domain for 2a8b:
    6. Domains for 2ahs:
      1. 1368097Domain d2ahsa_: 2ahs A: [162814]
        automated match to d1rpma_
        complexed with cl, edo, na
      2. 1368098Domain d2ahsb_: 2ahs B: [162815]
        automated match to d1rpma_
        complexed with cl, edo, na
    7. Domain for 2b49:
    8. Domain for 2bij:
    9. Domain for 2bv5:
    10. Domain for 2c7s:
    11. Domain for 2cfv:
    12. Domain for 2cjz:
    13. Domains for 2g59:
      1. 1368115Domain d2g59a_: 2g59 A: [197935]
        automated match to d2g59b_
        complexed with po4
      2. 1368116Domain d2g59b_: 2g59 B: [193826]
        automated match to d2hc1a_
        complexed with po4
    14. Domains for 2gjt:
      1. 1368106Domain d2gjta_: 2gjt A: [193823]
        automated match to d2hc1a_
        complexed with cl
      2. 1368107Domain d2gjtb_: 2gjt B: [197957]
        automated match to d2gjta_
        complexed with cl
    15. Domain for 2gp0:
    16. Domains for 2h02:
      1. 1368133Domain d2h02a_: 2h02 A: [197994]
        automated match to d2h04a_
        complexed with 2un
      2. 1368134Domain d2h02b_: 2h02 B: [193819]
        automated match to d2hc1a_
        complexed with 2un
    17. Domain for 2h03:
    18. Domain for 2h04:
    19. Domains for 2h4v:
      1. 1368071Domain d2h4va_: 2h4v A: [230759]
        automated match to d3qcea_
        complexed with act, cl, edo, flc, na
      2. 1368072Domain d2h4vb_: 2h4v B: [230760]
        automated match to d3qcea_
        complexed with act, cl, edo, flc, na
    20. Domain for 2hc1:
    21. Domain for 2hc2:
    22. Domain for 2hvl:
    23. Domains for 2hy3:
      1. 1368151Domain d2hy3a_: 2hy3 A: [204656]
        automated match to d1yfoa_
        complexed with vo4
      2. 1368152Domain d2hy3b_: 2hy3 B: [204657]
        automated match to d1yfoa_
        complexed with vo4
    24. Domains for 2i1y:
      1. 1368128Domain d2i1ya_: 2i1y A: [204684]
        automated match to d1oesa_
        complexed with gol
      2. 1368129Domain d2i1yb_: 2i1y B: [204685]
        automated match to d1oesa_
        complexed with gol
    25. Domains for 2i3r:
      1. 1368095Domain d2i3ra_: 2i3r A: [204695]
        automated match to d2h02b_
        complexed with cl
      2. 1368096Domain d2i3rb_: 2i3r B: [204696]
        automated match to d2h02b_
        complexed with cl
    26. Domain for 2i3u:
    27. Domains for 2i4e:
      1. 1368086Domain d2i4ea_: 2i4e A: [204704]
        automated match to d2h04a_
        complexed with vo4
      2. 1368087Domain d2i4eb_: 2i4e B: [204705]
        automated match to d2h04a_
        complexed with vo4
    28. Domain for 2i4g:
    29. Domain for 2i4h:
    30. Domains for 2i5x:
      1. 1368081Domain d2i5xa_: 2i5x A: [204716]
        automated match to d2h04a_
        complexed with cl, mg, ua5
      2. 1368082Domain d2i5xb_: 2i5x B: [204717]
        automated match to d2h04a_
        complexed with cl, mg, ua5
    31. Domains for 2nt2:
      1. 1368103Domain d2nt2a_: 2nt2 A: [166343]
        automated match to d1m3ga_
        complexed with so4
      2. 1368104Domain d2nt2b_: 2nt2 B: [166344]
        automated match to d1m3ga_
        complexed with so4
      3. 1368105Domain d2nt2c_: 2nt2 C: [166345]
        automated match to d1m3ga_
        complexed with so4
    32. Domain for 2nz6:
    33. Domain for 2oud:
    34. Domains for 2p6x:
      1. 1368091Domain d2p6xa_: 2p6x A: [231137]
        automated match to d2p6xb_
        complexed with cl, edo
      2. 1368092Domain d2p6xb_: 2p6x B: [205453]
        automated match to d2h04a_
        complexed with cl, edo
    35. Domain for 2pbn:
    36. Domains for 2qct:
      1. 1368154Domain d2qcta_: 2qct A: [231198]
        automated match to d3h2xa_
        complexed with 561, edo
      2. 1368155Domain d2qctb_: 2qct B: [231197]
        automated match to d3h2xa_
        complexed with 561, edo
    37. Domain for 2qdc:
    38. Domain for 2qdm:
    39. Domain for 2qdp:
    40. Domains for 2qep:
      1. 1368147Domain d2qepa_: 2qep A: [231203]
        automated match to d2i1yb_
        complexed with cl
      2. 1368148Domain d2qepb_: 2qep B: [231204]
        automated match to d2i1yb_
        complexed with cl
    41. Domain for 2r0b:
    42. Domain for 3d42:
    43. Domain for 3d44:
    44. Domain for 3h2x:
    45. Domain for 3mow:
    46. Domain for 3o4s:
    47. Domain for 3o4t:
    48. Domain for 3o4u:
    49. Domains for 3qcb:
      1. 1368130Domain d3qcba_: 3qcb A: [215149]
        automated match to d1yfoa_
        complexed with so4
      2. 1368131Domain d3qcbb_: 3qcb B: [215150]
        automated match to d1yfoa_
        complexed with so4
    50. Domains for 3qcc:
      1. 1368118Domain d3qcca_: 3qcc A: [215151]
        automated match to d1yfoa_
        complexed with vo4
      2. 1368119Domain d3qccb_: 3qcc B: [215152]
        automated match to d1yfoa_
        complexed with vo4
    51. Domain for 3qcd:
    52. Domains for 3qce:
      1. 1368122Domain d3qcea_: 3qce A: [215154]
        automated match to d1yfoa_
        complexed with nxy, so4
      2. 1368123Domain d3qceb_: 3qce B: [215155]
        automated match to d1yfoa_
        complexed with nxy, so4
    53. Domains for 3qcf:
      1. 1368149Domain d3qcfa_: 3qcf A: [215156]
        automated match to d1yfoa_
        complexed with nxy, so4
      2. 1368150Domain d3qcfb_: 3qcf B: [215157]
        automated match to d1yfoa_
        complexed with nxy, so4
    54. Domain for 3qcg:
    55. Domain for 3qch:
    56. Domain for 3qci:
    57. Domain for 3qcj:
    58. Domain for 3qck:
    59. Domain for 3qcl:
    60. Domains for 3qcm:
      1. 1368137Domain d3qcma_: 3qcm A: [215164]
        automated match to d1yfoa_
        complexed with mes, nxw
      2. 1368138Domain d3qcmb_: 3qcm B: [215165]
        automated match to d1yfoa_
        complexed with mes, nxw
    61. Domain for 3qcn:
    62. Domain for 3s4e:
    63. Domain for 4ikc:
    64. Domain for 4j51:
    65. Domains for 4jmk:
      1. 1368112Domain d4jmka_: 4jmk A: [237170]
        automated match to d3lj8a_
        complexed with so4
      2. 1368113Domain d4jmkb_: 4jmk B: [237171]
        automated match to d3lj8a_
        complexed with so4
  4. 1368156Mouse (Mus musculus) [TaxId:10090] [193198] (1 PDB entry)
  5. 1368158Norway rat (Rattus norvegicus) [TaxId:10116] [225183] (1 PDB entry)

More info for Protein automated matches from c.45.1.0: automated matches

Timeline for Protein automated matches from c.45.1.0: automated matches: