PDB entry 2nv5

View 2nv5 on RCSB PDB site
Description: Crystal structure of a C-terminal phosphatase domain of Rattus norvegicus ortholog of human protein tyrosine phosphatase, receptor type, D (PTPRD)
Class: hydrolase
Keywords: PHOSPHATASE, Structural Genomics, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, HYDROLASE
Deposited on 2006-11-10, released 2006-11-21
The last revision prior to the SCOPe 2.03 freeze date was dated 2012-10-24, with a file datestamp of 2012-10-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.199
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ptprd, phosphatase
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PTPRD
    Database cross-references and differences (RAF-indexed):
    • GB XP_233065
    Domains in SCOPe 2.03: d2nv5a_
  • Chain 'B':
    Compound: ptprd, phosphatase
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PTPRD
    Database cross-references and differences (RAF-indexed):
    • GB XP_233065
    Domains in SCOPe 2.03: d2nv5b_
  • Chain 'C':
    Compound: ptprd, phosphatase
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PTPRD
    Database cross-references and differences (RAF-indexed):
    • GB XP_233065
    Domains in SCOPe 2.03: d2nv5c_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2nv5A (A:)
mslashppipileladhierlkandnlkfsqeyesidpgqqftwehsnlevnkpknryan
viaydhsrvllsaiegipgsdyvnanyidgyrkqnayiatqgslpetfgdfwrmiweqrs
atvvmmtkleersrvkcdqywpsrgtethglvqvtlldtvelatycvrtfalykngssek
revrqfqftawpdhgvpehptpflaflrrvktcnppdagpmvvhcsagvgrtgcfivida
mlerikhektvdiyghvtlmraqrnymvqtedqyifihdalleavtcgnteeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2nv5A (A:)
shppipileladhierlkandnlkfsqeyesidpgqqftwehsnlevnkpknryanviay
dhsrvllsaiegipgsdyvnanyidgyrkqnayiatqgslpetfgdfwrmiweqrsatvv
mmtkleersrvkcdqywpsrgtethglvqvtlldtvelatycvrtfalykngssekrevr
qfqftawpdhgvpehptpflaflrrvktcnppdagpmvvhcsagvgrtgcfividamler
ikhektvdiyghvtlmraqrnymvqtedqyifihdalleavtc

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2nv5B (B:)
mslashppipileladhierlkandnlkfsqeyesidpgqqftwehsnlevnkpknryan
viaydhsrvllsaiegipgsdyvnanyidgyrkqnayiatqgslpetfgdfwrmiweqrs
atvvmmtkleersrvkcdqywpsrgtethglvqvtlldtvelatycvrtfalykngssek
revrqfqftawpdhgvpehptpflaflrrvktcnppdagpmvvhcsagvgrtgcfivida
mlerikhektvdiyghvtlmraqrnymvqtedqyifihdalleavtcgnteeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2nv5B (B:)
shppipileladhierlkandnlkfsqeyesidpgqqftwehsnlevnkpknryanviay
dhsrvllsaiegipgsdyvnanyidgyrkqnayiatqgslpetfgdfwrmiweqrsatvv
mmtkleersrvkcdqywpsrgtethglvqvtlldtvelatycvrtfalykngssekrevr
qfqftawpdhgvpehptpflaflrrvktcnppdagpmvvhcsagvgrtgcfividamler
ikhektvdiyghvtlmraqrnymvqtedqyifihdalleavtc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2nv5C (C:)
mslashppipileladhierlkandnlkfsqeyesidpgqqftwehsnlevnkpknryan
viaydhsrvllsaiegipgsdyvnanyidgyrkqnayiatqgslpetfgdfwrmiweqrs
atvvmmtkleersrvkcdqywpsrgtethglvqvtlldtvelatycvrtfalykngssek
revrqfqftawpdhgvpehptpflaflrrvktcnppdagpmvvhcsagvgrtgcfivida
mlerikhektvdiyghvtlmraqrnymvqtedqyifihdalleavtcgnteeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2nv5C (C:)
shppipileladhierlkandnlkfsqeyesidpgqqftwehsnlevnkpknryanviay
dhsrvllsaiegipgsdyvnanyidgyrkqnayiatqgslpetfgdfwrmiweqrsatvv
mmtkleersrvkcdqywpsrgtethglvqvtlldtvelatycvrtfalykngssekrevr
qfqftawpdhgvpehptpflaflrrvktcnppdagpmvvhcsagvgrtgcfividamler
ikhektvdiyghvtlmraqrnymvqtedqyifihdalleavtc