SCOPe 2.07: Protein: Small nuclear ribonucleoprotein F, Smf

Lineage for Protein: Small nuclear ribonucleoprotein F, Smf

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.38: Sm-like fold [50181] (5 superfamilies)
core: barrel, open; n*=4, S*=8; meander; SH3-like topology
Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families)
Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (11 proteins)
forms homo and heteroheptameric ring structures
Pfam PF01423
Protein Small nuclear ribonucleoprotein F, Smf [82087] (2 species)
3jb9 chains I and n are F subunits from fission yeast; not included because sids are not case sensitive

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [82088] (2 PDB entries)
1. Domains for 1n9r:
  1. Domain d1n9ra_: 1n9r A: [80344]
  2. Domain d1n9rb_: 1n9r B: [80345]
  3. Domain d1n9rc_: 1n9r C: [80346]
  4. Domain d1n9rd_: 1n9r D: [80347]
  5. Domain d1n9re_: 1n9r E: [80348]
  6. Domain d1n9rf_: 1n9r F: [80349]
  7. Domain d1n9rg_: 1n9r G: [80350]
2. Domains for 1n9s:
  1. Domain d1n9sa_: 1n9s A: [80351]
  2. Domain d1n9sb_: 1n9s B: [80352]
  3. Domain d1n9sc_: 1n9s C: [80353]
  4. Domain d1n9sd_: 1n9s D: [80354]
  5. Domain d1n9se_: 1n9s E: [80355]
  6. Domain d1n9sf_: 1n9s F: [80356]
  7. Domain d1n9sg_: 1n9s G: [80357]
  8. Domain d1n9sh_: 1n9s H: [80358]
  9. Domain d1n9si_: 1n9s I: [80359]
  10. Domain d1n9sj_: 1n9s J: [80360]
  11. Domain d1n9sk_: 1n9s K: [80361]
  12. Domain d1n9sl_: 1n9s L: [80362]
  13. Domain d1n9sm_: 1n9s M: [80363]
  14. Domain d1n9sn_: 1n9s N: [80364]
Saccharomyces cerevisiae S288c [TaxId:559292] [346236] (1 PDB entry)
- Domains for 3jcm:
  1. Domain d3jcmw_: 3jcm W: [344847]
    Other proteins in same PDB: d3jcmj_, d3jcmo_, d3jcmp_, d3jcmq_, d3jcmr_, d3jcms_, d3jcmt_, d3jcmu_, d3jcmv_, d3jcmx_, d3jcmy_
    complexed with gtp, m7m
  2. Domain d3jcmz_: 3jcm Z: [344850]
    Other proteins in same PDB: d3jcmj_, d3jcmo_, d3jcmp_, d3jcmq_, d3jcmr_, d3jcms_, d3jcmt_, d3jcmu_, d3jcmv_, d3jcmx_, d3jcmy_
    complexed with gtp, m7m

More info for Protein Small nuclear ribonucleoprotein F, Smf from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP

Timeline for Protein Small nuclear ribonucleoprotein F, Smf from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP:

Protein Small nuclear ribonucleoprotein F, Smf from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP first appeared in SCOP 1.63
Protein Small nuclear ribonucleoprotein F, Smf from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in SCOPe 2.06
Protein Small nuclear ribonucleoprotein F, Smf from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in the current release, SCOPe 2.08