Lineage for Family c.1.14.1: RuBisCo, large subunit, C-terminal domain

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2838499Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) (S)
    automatically mapped to Pfam PF00016
  5. 2838500Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins)
    N-terminal domain is alpha+beta

Proteins:

  1. 2838501Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species)
    1. 2838502Species Alcaligenes eutrophus [TaxId:106590] [51655] (1 PDB entry)
    2. 2838507Species Chlorobium tepidum [TaxId:1097] [117389] (2 PDB entries)
      Uniprot Q8KBL4 1-428
    3. 2838512Species Galdieria partita [TaxId:83374] [51654] (2 PDB entries)
    4. 2838525Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [69403] (6 PDB entries)
    5. 2838578Species Halothiobacillus neapolitanus [TaxId:927] [141849] (1 PDB entry)
      Uniprot O85040 143-460
    6. 2838580Species Methanococcoides burtonii [TaxId:29291] [346274] (1 PDB entry)
    7. 2838586Species Pyrococcus horikoshii [TaxId:53953] [141850] (3 PDB entries)
      Uniprot O58677 134-424
    8. 2838597Species Rhodospirillum rubrum [TaxId:1085] [51657] (5 PDB entries)
    9. 2838608Species Rice (Oryza sativa) [TaxId:4530] [117390] (5 PDB entries)
      Uniprot P12089
    10. 2838627Species Spinach (Spinacia oleracea) [TaxId:3562] [51653] (11 PDB entries)
    11. 2838684Species Synechococcus elongatus [TaxId:1140] [361124] (1 PDB entry)
    12. 2838687Species Synechococcus sp., strain pcc 6301 [TaxId:1131] [51656] (2 PDB entries)
    13. 2838704Species Thermococcus kodakaraensis [TaxId:311400] [69404] (2 PDB entries)
    14. 2838720Species Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId:4097] [51652] (5 PDB entries)
  2. 2838730automated matches [226984] (16 species)
    not a true protein
    1. 2838731Species Chaetoceros socialis [TaxId:163503] [353964] (1 PDB entry)
    2. 2838740Species Endosymbiont of [TaxId:54396] [377647] (1 PDB entry)
    3. 2838744Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [225548] (9 PDB entries)
    4. 2838817Species Nostoc sp. [TaxId:103690] [385348] (2 PDB entries)
    5. 2838830Species Pea (Pisum sativum) [TaxId:3888] [226514] (2 PDB entries)
    6. 2838839Species Red algae (Galdieria sulphuraria) [TaxId:130081] [226525] (3 PDB entries)
    7. 2838843Species Rhodopseudomonas palustris [TaxId:1076] [327791] (7 PDB entries)
    8. 2838893Species Rhodopseudomonas palustris [TaxId:1] [328884] (1 PDB entry)
    9. 2838900Species Rhodopseudomonas palustris [TaxId:258594] [257017] (3 PDB entries)
    10. 2838924Species Rhodospirillum rubrum [TaxId:1085] [328914] (1 PDB entry)
    11. 2838927Species Skeletonema marinoi [TaxId:267567] [353916] (1 PDB entry)
    12. 2838932Species Thalassiosira antarctica [TaxId:555753] [346600] (1 PDB entry)
    13. 2838941Species Thalassiosira hyalina [TaxId:1234817] [346766] (1 PDB entry)
    14. 2838950Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [336637] (1 PDB entry)
    15. 2838953Species Thermosynechococcus elongatus [TaxId:197221] [226344] (2 PDB entries)
    16. 2838966Species Wheat (Triticum aestivum) [TaxId:4565] [348226] (1 PDB entry)

More info for Family c.1.14.1: RuBisCo, large subunit, C-terminal domain

Timeline for Family c.1.14.1: RuBisCo, large subunit, C-terminal domain: