Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies) contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678 the first seven superfamilies have similar phosphate-binding sites |
Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) automatically mapped to Pfam PF00016 |
Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 proteins) N-terminal domain is alpha+beta |
Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (14 species) |
Species Alcaligenes eutrophus [TaxId:106590] [51655] (1 PDB entry) |
Species Chlorobium tepidum [TaxId:1097] [117389] (2 PDB entries) Uniprot Q8KBL4 1-428 |
Species Galdieria partita [TaxId:83374] [51654] (2 PDB entries) |
Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [69403] (6 PDB entries) |
Species Halothiobacillus neapolitanus [TaxId:927] [141849] (1 PDB entry) Uniprot O85040 143-460 |
Species Methanococcoides burtonii [TaxId:29291] [346274] (1 PDB entry) |
Species Pyrococcus horikoshii [TaxId:53953] [141850] (3 PDB entries) Uniprot O58677 134-424 |
Species Rhodospirillum rubrum [TaxId:1085] [51657] (5 PDB entries) |
Species Rice (Oryza sativa) [TaxId:4530] [117390] (5 PDB entries) Uniprot P12089 |
Species Spinach (Spinacia oleracea) [TaxId:3562] [51653] (11 PDB entries) |
Species Synechococcus elongatus [TaxId:1140] [361124] (1 PDB entry) |
Species Synechococcus sp., strain pcc 6301 [TaxId:1131] [51656] (2 PDB entries) |
Species Thermococcus kodakaraensis [TaxId:311400] [69404] (2 PDB entries) |
Species Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId:4097] [51652] (5 PDB entries) |
automated matches [226984] (16 species) not a true protein |
Species Chaetoceros socialis [TaxId:163503] [353964] (1 PDB entry) |
Species Endosymbiont of [TaxId:54396] [377647] (1 PDB entry) |
Species Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [225548] (9 PDB entries) |
Species Nostoc sp. [TaxId:103690] [385348] (2 PDB entries) |
Species Pea (Pisum sativum) [TaxId:3888] [226514] (2 PDB entries) |
Species Red algae (Galdieria sulphuraria) [TaxId:130081] [226525] (3 PDB entries) |
Species Rhodopseudomonas palustris [TaxId:1076] [327791] (7 PDB entries) |
Species Rhodopseudomonas palustris [TaxId:1] [328884] (1 PDB entry) |
Species Rhodopseudomonas palustris [TaxId:258594] [257017] (3 PDB entries) |
Species Rhodospirillum rubrum [TaxId:1085] [328914] (1 PDB entry) |
Species Skeletonema marinoi [TaxId:267567] [353916] (1 PDB entry) |
Species Thalassiosira antarctica [TaxId:555753] [346600] (1 PDB entry) |
Species Thalassiosira hyalina [TaxId:1234817] [346766] (1 PDB entry) |
Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [336637] (1 PDB entry) |
Species Thermosynechococcus elongatus [TaxId:197221] [226344] (2 PDB entries) |
Species Wheat (Triticum aestivum) [TaxId:4565] [348226] (1 PDB entry) |
Timeline for Family c.1.14.1: RuBisCo, large subunit, C-terminal domain: