Lineage for Species: Rice (Oryza sativa) [TaxId: 4530]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2088460Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) (S)
    automatically mapped to Pfam PF00016
  5. 2088461Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 protein domains)
    N-terminal domain is alpha+beta
  6. 2088462Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651] (12 species)
  7. 2088547Species Rice (Oryza sativa) [TaxId:4530] [117390] (3 PDB entries)
    Uniprot P12089

PDB entries in Species: Rice (Oryza sativa) [TaxId: 4530]:

  1. Domain(s) for 1wdd:
    1. 2088548Domain d1wdda1: 1wdd A:151-475 [114528]
      Other proteins in same PDB: d1wdda2, d1wdde2, d1wdds_, d1wddw_
      complexed with cap, gol, mg
    2. 2088549Domain d1wdde1: 1wdd E:151-475 [114530]
      Other proteins in same PDB: d1wdda2, d1wdde2, d1wdds_, d1wddw_
      complexed with cap, gol, mg
  2. Domain(s) for 3axk:
    1. 2088558Domain d3axka2: 3axk A:151-462 [198947]
      Other proteins in same PDB: d3axka1, d3axkb1, d3axks_, d3axkt_
      automated match to d1wdda1
      complexed with gol, mg, ndp
    2. 2088559Domain d3axkb2: 3axk B:151-463 [198949]
      Other proteins in same PDB: d3axka1, d3axkb1, d3axks_, d3axkt_
      automated match to d1wdda1
      complexed with gol, mg, ndp
  3. Domain(s) for 3axm:
    1. 2088550Domain d3axma2: 3axm A:151-463 [198951]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg
    2. 2088551Domain d3axmb2: 3axm B:151-463 [198953]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg
    3. 2088552Domain d3axmc2: 3axm C:151-463 [198955]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg
    4. 2088553Domain d3axmd2: 3axm D:151-463 [198957]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg
    5. 2088554Domain d3axme2: 3axm E:151-463 [198959]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg
    6. 2088555Domain d3axmf2: 3axm F:151-463 [198961]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg
    7. 2088556Domain d3axmg2: 3axm G:151-463 [198963]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg
    8. 2088557Domain d3axmh2: 3axm H:151-463 [198965]
      Other proteins in same PDB: d3axma1, d3axmb1, d3axmc1, d3axmd1, d3axme1, d3axmf1, d3axmg1, d3axmh1, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
      automated match to d1wdda1
      complexed with 6pg, mg

More info for Species Rice (Oryza sativa) [TaxId:4530] from c.1.14.1 Ribulose 1,5-bisphosphate carboxylase-oxygenase

Timeline for Species Rice (Oryza sativa) [TaxId:4530] from c.1.14.1 Ribulose 1,5-bisphosphate carboxylase-oxygenase: