Lineage for Species: Rhodopseudomonas palustris [TaxId: 258594]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2088460Superfamily c.1.14: RuBisCo, C-terminal domain [51649] (2 families) (S)
    automatically mapped to Pfam PF00016
  5. 2088461Family c.1.14.1: RuBisCo, large subunit, C-terminal domain [51650] (2 protein domains)
    N-terminal domain is alpha+beta
  6. 2088660Protein automated matches [226984] (9 species)
    not a true protein
  7. 2088747Species Rhodopseudomonas palustris [TaxId:258594] [257017] (3 PDB entries)

PDB entries in Species: Rhodopseudomonas palustris [TaxId: 258594]:

  1. Domain(s) for 4lf1:
    1. 2088754Domain d4lf1a2: 4lf1 A:139-457 [257018]
      Other proteins in same PDB: d4lf1a1, d4lf1b1, d4lf1c1, d4lf1d1, d4lf1e1, d4lf1f1
      automated match to d5ruba1
      complexed with cap, mg
    2. 2088755Domain d4lf1b2: 4lf1 B:139-453 [262938]
      Other proteins in same PDB: d4lf1a1, d4lf1b1, d4lf1c1, d4lf1d1, d4lf1e1, d4lf1f1
      automated match to d4lf1a2
      complexed with cap, mg
    3. 2088756Domain d4lf1c2: 4lf1 C:139-453 [262940]
      Other proteins in same PDB: d4lf1a1, d4lf1b1, d4lf1c1, d4lf1d1, d4lf1e1, d4lf1f1
      automated match to d4lf1a2
      complexed with cap, mg
    4. 2088757Domain d4lf1d2: 4lf1 D:139-457 [262942]
      Other proteins in same PDB: d4lf1a1, d4lf1b1, d4lf1c1, d4lf1d1, d4lf1e1, d4lf1f1
      automated match to d4lf1a2
      complexed with cap, mg
    5. 2088758Domain d4lf1e2: 4lf1 E:139-455 [262944]
      Other proteins in same PDB: d4lf1a1, d4lf1b1, d4lf1c1, d4lf1d1, d4lf1e1, d4lf1f1
      automated match to d4lf1a2
      complexed with cap, mg
    6. 2088759Domain d4lf1f2: 4lf1 F:139-456 [262946]
      Other proteins in same PDB: d4lf1a1, d4lf1b1, d4lf1c1, d4lf1d1, d4lf1e1, d4lf1f1
      automated match to d4lf1a2
      complexed with cap, mg
  2. Domain(s) for 4lf2:
    1. 2088748Domain d4lf2a2: 4lf2 A:139-457 [266660]
      Other proteins in same PDB: d4lf2a1, d4lf2b1, d4lf2c1, d4lf2d1, d4lf2e1, d4lf2f1
      automated match to d4lf1a2
      complexed with co3, mg, so4
    2. 2088749Domain d4lf2b2: 4lf2 B:139-453 [266662]
      Other proteins in same PDB: d4lf2a1, d4lf2b1, d4lf2c1, d4lf2d1, d4lf2e1, d4lf2f1
      automated match to d4lf1a2
      complexed with co3, mg, so4
    3. 2088750Domain d4lf2c2: 4lf2 C:139-453 [266664]
      Other proteins in same PDB: d4lf2a1, d4lf2b1, d4lf2c1, d4lf2d1, d4lf2e1, d4lf2f1
      automated match to d4lf1a2
      complexed with co3, mg, so4
    4. 2088751Domain d4lf2d2: 4lf2 D:139-457 [266666]
      Other proteins in same PDB: d4lf2a1, d4lf2b1, d4lf2c1, d4lf2d1, d4lf2e1, d4lf2f1
      automated match to d4lf1a2
      complexed with co3, mg, so4
    5. 2088752Domain d4lf2e2: 4lf2 E:139-456 [266668]
      Other proteins in same PDB: d4lf2a1, d4lf2b1, d4lf2c1, d4lf2d1, d4lf2e1, d4lf2f1
      automated match to d4lf1a2
      complexed with co3, mg, so4
    6. 2088753Domain d4lf2f2: 4lf2 F:139-457 [266670]
      Other proteins in same PDB: d4lf2a1, d4lf2b1, d4lf2c1, d4lf2d1, d4lf2e1, d4lf2f1
      automated match to d4lf1a2
      complexed with co3, mg, so4
  3. Domain(s) for 5koz:
    1. 2293165Domain d5kozi2: 5koz I:139-455 [336466]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    2. 2293167Domain d5kozc2: 5koz C:139-457 [336468]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    3. 2293170Domain d5koze2: 5koz E:139-455 [336471]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    4. 2293175Domain d5kozg2: 5koz G:139-455 [336476]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    5. 2293186Domain d5kozk2: 5koz K:139-456 [336487]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    6. 2293188Domain d5kozh2: 5koz H:139-455 [336489]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    7. 2293190Domain d5kozj2: 5koz J:139-455 [336491]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    8. 2293195Domain d5kozl2: 5koz L:139-455 [336496]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    9. 2293202Domain d5kozf2: 5koz F:139-455 [336503]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    10. 2293223Domain d5koza2: 5koz A:139-455 [336524]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant
    11. 2293225Domain d5kozb2: 5koz B:139-455 [336526]
      Other proteins in same PDB: d5koza1, d5kozb1, d5kozc1, d5kozd1, d5koze1, d5kozf1, d5kozg1, d5kozh1, d5kozi1, d5kozj1, d5kozk1, d5kozl1
      automated match to d4lf2a2
      complexed with cap, co3, mg; mutant

More info for Species Rhodopseudomonas palustris [TaxId:258594] from c.1.14.1 automated matches

Timeline for Species Rhodopseudomonas palustris [TaxId:258594] from c.1.14.1 automated matches: