SCOPe 2.06: Protein: D2 core SNRNP protein

Lineage for Protein: D2 core SNRNP protein

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)
Fold b.38: Sm-like fold [50181] (5 superfamilies)
core: barrel, open; n*=4, S*=8; meander; SH3-like topology
Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families)
Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (8 proteins)
forms homo and heteroheptameric ring structures
Protein D2 core SNRNP protein [50186] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [50187] (5 PDB entries)

Domain for 1b34:
- Domain d1b34b_: 1b34 B: [24797]
  Other proteins in same PDB: d1b34a_
  protein/RNA complex

Domains for 1vu2:

Domain d1vu2b_: 1vu2 B: [240851]
Other proteins in same PDB: d1vu24_, d1vu2a_, d1vu2d_, d1vu2f_, d1vu2g_, d1vu2h_, d1vu2i_, d1vu2l_, d1vu2n_, d1vu2o_, d1vu2p_, d1vu2q_, d1vu2t_, d1vu2v_, d1vu2w_, d1vu2x_, d1vu2y_
complexed with so4
complexed with so4

Domain d1vu2j_: 1vu2 J: [240857]
Other proteins in same PDB: d1vu24_, d1vu2a_, d1vu2d_, d1vu2f_, d1vu2g_, d1vu2h_, d1vu2i_, d1vu2l_, d1vu2n_, d1vu2o_, d1vu2p_, d1vu2q_, d1vu2t_, d1vu2v_, d1vu2w_, d1vu2x_, d1vu2y_
complexed with so4
complexed with so4

Domain d1vu2r_: 1vu2 R: [240863]
Other proteins in same PDB: d1vu24_, d1vu2a_, d1vu2d_, d1vu2f_, d1vu2g_, d1vu2h_, d1vu2i_, d1vu2l_, d1vu2n_, d1vu2o_, d1vu2p_, d1vu2q_, d1vu2t_, d1vu2v_, d1vu2w_, d1vu2x_, d1vu2y_
complexed with so4
complexed with so4

Domain d1vu2z_: 1vu2 Z: [240869]
Other proteins in same PDB: d1vu24_, d1vu2a_, d1vu2d_, d1vu2f_, d1vu2g_, d1vu2h_, d1vu2i_, d1vu2l_, d1vu2n_, d1vu2o_, d1vu2p_, d1vu2q_, d1vu2t_, d1vu2v_, d1vu2w_, d1vu2x_, d1vu2y_
complexed with so4
complexed with so4

Domains for 1vu3:

Domain d1vu3b_: 1vu3 B: [240871]
Other proteins in same PDB: d1vu3a_, d1vu3d_, d1vu3f_, d1vu3g_, d1vu3h_, d1vu3i_, d1vu3l_, d1vu3n_, d1vu3o_, d1vu3p_, d1vu3q_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3y_
complexed with so4
complexed with so4

Domain d1vu3j_: 1vu3 J: [240877]
Other proteins in same PDB: d1vu3a_, d1vu3d_, d1vu3f_, d1vu3g_, d1vu3h_, d1vu3i_, d1vu3l_, d1vu3n_, d1vu3o_, d1vu3p_, d1vu3q_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3y_
complexed with so4
complexed with so4

Domain d1vu3r_: 1vu3 R: [240883]
Other proteins in same PDB: d1vu3a_, d1vu3d_, d1vu3f_, d1vu3g_, d1vu3h_, d1vu3i_, d1vu3l_, d1vu3n_, d1vu3o_, d1vu3p_, d1vu3q_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3y_
complexed with so4
complexed with so4

Domain d1vu3z_: 1vu3 Z: [240888]
Other proteins in same PDB: d1vu3a_, d1vu3d_, d1vu3f_, d1vu3g_, d1vu3h_, d1vu3i_, d1vu3l_, d1vu3n_, d1vu3o_, d1vu3p_, d1vu3q_, d1vu3t_, d1vu3v_, d1vu3x_, d1vu3y_
complexed with so4
complexed with so4

Domain for 3s6n:
- Domain d3s6nb_: 3s6n B: [200590]
  Other proteins in same PDB: d3s6na_, d3s6nf_, d3s6ng_
  automated match to d1b34b_
  protein/RNA complex

Domains for 4f77:

Domain d4f77b_: 4f77 B: [251905]
Other proteins in same PDB: d4f774_, d4f77a_, d4f77d_, d4f77f_, d4f77g_, d4f77h_, d4f77i_, d4f77l_, d4f77n_, d4f77o_, d4f77p_, d4f77q_, d4f77t_, d4f77v_, d4f77w_, d4f77x_, d4f77y_
complexed with so4
complexed with so4

Domain d4f77j_: 4f77 J: [251911]
Other proteins in same PDB: d4f774_, d4f77a_, d4f77d_, d4f77f_, d4f77g_, d4f77h_, d4f77i_, d4f77l_, d4f77n_, d4f77o_, d4f77p_, d4f77q_, d4f77t_, d4f77v_, d4f77w_, d4f77x_, d4f77y_
complexed with so4
complexed with so4

Domain d4f77r_: 4f77 R: [251917]
Other proteins in same PDB: d4f774_, d4f77a_, d4f77d_, d4f77f_, d4f77g_, d4f77h_, d4f77i_, d4f77l_, d4f77n_, d4f77o_, d4f77p_, d4f77q_, d4f77t_, d4f77v_, d4f77w_, d4f77x_, d4f77y_
complexed with so4
complexed with so4

Domain d4f77z_: 4f77 Z: [251923]
Other proteins in same PDB: d4f774_, d4f77a_, d4f77d_, d4f77f_, d4f77g_, d4f77h_, d4f77i_, d4f77l_, d4f77n_, d4f77o_, d4f77p_, d4f77q_, d4f77t_, d4f77v_, d4f77w_, d4f77x_, d4f77y_
complexed with so4
complexed with so4

Mouse (Mus musculus) [TaxId:10090] [224862] (1 PDB entry)
- Domains for 4f7u:
  1. Domain d4f7ub_: 4f7u B: [221063]
    Other proteins in same PDB: d4f7ua_, d4f7uc_, d4f7uf_, d4f7ug_, d4f7ui_, d4f7uj_
    automated match to d1b34b_
    complexed with p6g
  2. Domain d4f7ud_: 4f7u D: [221065]
    Other proteins in same PDB: d4f7ua_, d4f7uc_, d4f7uf_, d4f7ug_, d4f7ui_, d4f7uj_
    automated match to d1b34b_
    complexed with p6g

More info for Protein D2 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP

Timeline for Protein D2 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP:

Protein D2 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP first appeared (with stable ids) in SCOP 1.55
Protein D2 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in SCOPe 2.05
Protein D2 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in SCOPe 2.07
Protein D2 core SNRNP protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP appears in the current release, SCOPe 2.08