SCOPe 2.06: Domain d3s6nb_: 3s6n B:

Lineage for d3s6nb_ (3s6n B:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.38: Sm-like fold [50181] (5 superfamilies)
   core: barrel, open; n*=4, S*=8; meander; SH3-like topology

4. Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families)

5. Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (8 proteins)
   forms homo and heteroheptameric ring structures

6. Protein D2 core SNRNP protein [50186] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [50187] (5 PDB entries)

8. Domain d3s6nb_: 3s6n B: [200590]
   Other proteins in same PDB: d3s6na_, d3s6nf_, d3s6ng_
   automated match to d1b34b_
   protein/RNA complex

Details for d3s6nb_

PDB Entry: 3s6n, 2.5 Å

PDB Description: crystal structure of the gemin2-binding domain of smn, gemin2 in complex with smd1/d2/f/e/g from human

PDB Compounds: (B:) Small nuclear ribonucleoprotein Sm D2

SCOPe Domain Sequences for d3s6nb_:

Sequence, based on SEQRES records:

>d3s6nb_ b.38.1.1 (B:) D2 core SNRNP protein {Human (Homo sapiens) [TaxId: 9606]}
efntgplsvltqsvknntqvlincrnnkkllgrvkafdrhcnmvlenvkemwtevpksgk
gkkkskpvnkdryiskmflrgdsvivvlrnplia

Sequence, based on observed residues (ATOM records):

>d3s6nb_ b.38.1.1 (B:) D2 core SNRNP protein {Human (Homo sapiens) [TaxId: 9606]}
efntgplsvltqsvknntqvlincrnnkkllgrvkafdrhcnmvlenvkemwtevnkdry
iskmflrgdsvivvlrnplia

Timeline for d3s6nb_:

• d3s6nb_ first appeared in SCOPe 2.03
  
• d3s6nb_ appears in SCOPe 2.05
  
• d3s6nb_ last appears in SCOPe 2.07