SCOPe 2.08: Species: Human spumaretrovirus [TaxID:11963]

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.34: SH3-like barrel [50036] (21 superfamilies)
barrel, partly opened; n*=4, S*=8; meander
the last strand is interrupted by a turn of 3-10 helix
Superfamily b.34.7: DNA-binding domain of retroviral integrase [50122] (2 families)
Family b.34.7.1: DNA-binding domain of retroviral integrase [50123] (1 protein)
Pfam PF00552, Pfam PF18103
Protein DNA-binding domain of retroviral integrase [50124] (4 species)
Species Human spumaretrovirus [TaxID:11963] [419616] (6 PDB entries)

Domain(s) for 3l2q:
- Domain d3l2qa2: 3l2q A:316-374 [413294]
  Other proteins in same PDB: d3l2qa1, d3l2qa3
  protein/DNA complex; complexed with gol, zn
Domain(s) for 3l2s:
- Domain d3l2sa3: 3l2s A:316-374 [413298]
  Other proteins in same PDB: d3l2sa1, d3l2sa2
  automated match to d3l2qa2
  protein/DNA complex; complexed with gol, mn, nh4, zn
Domain(s) for 3l2u:
- Domain d3l2ua3: 3l2u A:316-374 [413301]
  Other proteins in same PDB: d3l2ua1, d3l2ua2
  automated match to d3l2qa2
  protein/DNA complex; complexed with elv, gol, mg, nh4, zn
Domain(s) for 3s3n:
- Domain d3s3na3: 3s3n A:316-375 [413410]
  Other proteins in same PDB: d3s3na1, d3s3na2
  automated match to d3l2qa2
  protein/DNA complex; complexed with dlu, gol, mg, nh4, so4, zn; mutant
Domain(s) for 3s3o:
- Domain d3s3oa3: 3s3o A:316-375 [413413]
  Other proteins in same PDB: d3s3oa1, d3s3oa2
  automated match to d3l2qa2
  protein/DNA complex; complexed with dlu, gol, hez, mg, nh4, so4, zn; mutant
Domain(s) for 4ztj:
- Domain d4ztja3: 4ztj A:316-375 [414550]
  Other proteins in same PDB: d4ztja1, d4ztja2, d4ztjb_
  automated match to d3l2qa2
  protein/DNA complex; complexed with 4rt, gol, mg, so4, zn

Timeline for Species Human spumaretrovirus [TaxID:11963] from b.34.7.1 DNA-binding domain of retroviral integrase:

Species Human spumaretrovirus [TaxID:11963] from b.34.7.1 DNA-binding domain of retroviral integrase is new in SCOPe 2.08-stable