SCOPe 2.08: Domain d2w3sf2: 2w3s F:124-777

Lineage for d2w3sf2 (2w3s F:124-777)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.133: Molybdenum cofactor-binding domain [56002] (1 superfamily)
   beta(2)-alpha-beta-alpha-beta; 2 layers: a/b; mixed sheet: order 1243: crossing loops

4. Superfamily d.133.1: Molybdenum cofactor-binding domain [56003] (2 families)
   duplication: consists of 4 structural repeats arranged in 2 lobes
   contains one left-hand beta-alpha-beta unit per lobe
   automatically mapped to Pfam PF02738

5. Family d.133.1.1: Molybdenum cofactor-binding domain [56004] (7 proteins)

6. Protein Xanthine dehydrogenase chain B, C-terminal domain [69813] (1 species)

7. Species Rhodobacter capsulatus [TaxId:1061] [69814] (4 PDB entries)

8. Domain d2w3sf2: 2w3s F:124-777 [206600]
   Other proteins in same PDB: d2w3sa1, d2w3sa2, d2w3sa3, d2w3sa4, d2w3sb1, d2w3sc1, d2w3sc2, d2w3sc3, d2w3sc4, d2w3sd1, d2w3se1, d2w3se2, d2w3se3, d2w3se4, d2w3sf1, d2w3sg1, d2w3sg2, d2w3sg3, d2w3sg4, d2w3sh1
   automated match to d1jrob2
   complexed with ca, fad, fes, mom, mte, xan

Details for d2w3sf2

PDB Entry: 2w3s, 2.6 Å

PDB Description: crystal structure of xanthine dehydrogenase (desulfo form) from rhodobacter capsulatus in complex with xanthine

PDB Compounds: (F:) Xanthine Dehydrogenase

SCOPe Domain Sequences for d2w3sf2:

Sequence, based on SEQRES records:

>d2w3sf2 d.133.1.1 (F:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]}
pailtldqalaadsrfeggpviwargdvetalagaahlaegcfeiggqehfylegqaala
lpaeggvvihcssqhpseiqhkvahalglafhdvrvemrrmgggfggkesqgnhlaiaca
vaaratgrpckmrydrdddmvitgkrhdfriryrigadasgkllgadfvhlarcgwsadl
slpvcdramlhadgsyfvpalrieshrlrtntqsntafrgfggpqgalgmeraiehlarg
mgrdpaelralnfydppergglsappsppepiatkktqtthygqevadcvlgelvtrlqk
sanfttrraeiaawnstnrtlargialspvkfgisftlthlnqagalvqiytdgsvalnh
ggtemgqglhakmvqvaaavlgidpvqvritatdtskvpntsataassgadmngmavkda
cetlrgrlagfvaaregcaardvifdagqvqasgkswrfaeivaaaymarislsatgfya
tpklswdrlrgqgrpflyfaygaaitevvidrltgenrilrtdilhdagaslnpaldigq
iegayvqgagwltteelvwdhcgrlmthapstykipafsdrprifnvalwdqpnreetif
rskavgeppfllgisaflalhdacaacgphwpdlqapatpeavlaavrraegra

Sequence, based on observed residues (ATOM records):

>d2w3sf2 d.133.1.1 (F:124-777) Xanthine dehydrogenase chain B, C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]}
pailtldqalaadsrfeggpviwargdvetalagaahlaegcfeiggqehfylegqaala
lpaeggvvihcssqhpseiqhkvahalglafhdvrvemrrmgggfggkesqgnhlaiaca
vaaratgrpckmrydrdddmvitgkrhdfriryrigadasgkllgadfvhlarcgwsadl
slpvcdramlhadgsyfvpalrieshrlrtntqsntafrgfggpqgalgmeraiehlarg
mgrdpaelralnfydppekktqtthygqevadcvlgelvtrlqksanfttrraeiaawns
tnrtlargialspvkfgisftlthlnqagalvqiytdgsvalnhggtemgqglhakmvqv
aaavlgidpvqvritatdtskvpntsataassgadmngmavkdacetlrgrlagfvaare
gcaardvifdagqvqasgkswrfaeivaaaymarislsatgfyatpklswdrlrgqgrpf
lyfaygaaitevvidrltgenrilrtdilhdagaslnpaldigqiegayvqgagwlttee
lvwdhcgrlmthapstykipafsdrprifnvalwdqpnreetifrskavgeppfllgisa
flalhdacaacgphwpdlqapatpeavlaavrraegra

Timeline for d2w3sf2:

• d2w3sf2 first appeared in SCOPe 2.03
  
• d2w3sf2 appears in SCOPe 2.07