Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1375163Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 1376104Superfamily c.56.3: Peptidyl-tRNA hydrolase-like [53178] (2 families) (S)
  5. 1376114Family c.56.3.0: automated matches [193325] (1 protein)
    not a true family
  6. 1376115Protein automated matches [193326] (5 species)
    not a true protein

Species:

  1. 1376116Acinetobacter baumannii [TaxId:575584] [196867] (11 PDB entries)
    1. Domain for 3wh4:
    2. Domain for 4fop:
    3. Domain for 4fot:
    4. Domain for 4hoy:
    5. Domain for 4iko:
    6. Domain for 4jwk:
    7. Domain for 4jx9:
    8. Domain for 4jy7:
    9. Domain for 4lwq:
    10. Domain for 4lwr:
    11. Domain for 4olj:
  2. 1376128Francisella tularensis [TaxId:119856] [233012] (1 PDB entry)
  3. 1376130Mycobacterium smegmatis [TaxId:246196] [225939] (3 PDB entries)
    1. Domain for 3kjz:
    2. Domain for 3kk0:
    3. Domain for 3p2j:
  4. 1376134Mycobacterium tuberculosis [TaxId:83332] [225299] (6 PDB entries)
    1. Domain for 2z2i:
    2. Domains for 2z2j:
      1. 1376138Domain d2z2ja_: 2z2j A: [207766]
        automated match to d4jy7a_
      2. 1376139Domain d2z2jb_: 2z2j B: [207767]
        automated match to d4jy7a_
    3. Domain for 2z2k:
    4. Domain for 3tck:
    5. Domains for 3tcn:
      1. 1376136Domain d3tcna_: 3tcn A: [216740]
        automated match to d4jy7a_
      2. 1376137Domain d3tcnb_: 3tcn B: [216741]
        automated match to d4jy7a_
    6. Domain for 3td2:
  5. 1376143Pseudomonas aeruginosa [TaxId:208964] [193327] (6 PDB entries)
    1. Domains for 4dhw:
      1. 1376150Domain d4dhwa_: 4dhw A: [219767]
        automated match to d4jc4a_
        complexed with 0l1
      2. 1376151Domain d4dhwb_: 4dhw B: [219768]
        automated match to d4jc4a_
        complexed with 0l1
    2. Domains for 4djj:
      1. 1376152Domain d4djja_: 4djj A: [219795]
        automated match to d4jc4a_
        protein/RNA complex; complexed with pml
      2. 1376153Domain d4djjb_: 4djj B: [219796]
        automated match to d4jc4a_
        protein/RNA complex; complexed with pml
    3. Domains for 4erx:
      1. 1376148Domain d4erxa_: 4erx A: [220788]
        automated match to d4jc4a_
        protein/RNA complex; complexed with peg
      2. 1376149Domain d4erxb_: 4erx B: [220789]
        automated match to d4jc4a_
        protein/RNA complex; complexed with peg
    4. Domains for 4fno:
      1. 1376146Domain d4fnoa_: 4fno A: [221374]
        automated match to d4jc4a_
        complexed with gol, peg
      2. 1376147Domain d4fnob_: 4fno B: [221375]
        automated match to d4jc4a_
        complexed with gol, peg
    5. Domain for 4fyj:
    6. Domain for 4jc4:

More info for Protein automated matches from c.56.3.0: automated matches

Timeline for Protein automated matches from c.56.3.0: automated matches: