Species:

1. Deinococcus radiodurans [TaxId:243230] [188648] (1 PDB entry)

   • Domains for 2vrn:

     1. Domain d2vrna_: 2vrn A: [168773] automated match to d1oi4a1 complexed with mg

     2. Domain d2vrnb_: 2vrn B: [168774] automated match to d1oi4a1 complexed with mg

2. Escherichia coli [TaxId:562] [186939] (6 PDB entries)

   1. Domain for 2ab0:

      • Domain d2ab0b_: 2ab0 B: [126502] Other proteins in same PDB: d2ab0a1 automated match to d1j42a_

   2. Domains for 3ttt:

      1. Domain d3ttta2: 3ttt A:598-753 [233721] Other proteins in same PDB: d3ttta1, d3tttb1, d3tttc1, d3tttd1 automated match to d1p80a1 complexed with hem

      2. Domain d3tttb2: 3ttt B:598-753 [233722] Other proteins in same PDB: d3ttta1, d3tttb1, d3tttc1, d3tttd1 automated match to d1p80a1 complexed with hem

      3. Domain d3tttc2: 3ttt C:598-753 [233724] Other proteins in same PDB: d3ttta1, d3tttb1, d3tttc1, d3tttd1 automated match to d1p80a1 complexed with hem

      4. Domain d3tttd2: 3ttt D:598-753 [233726] Other proteins in same PDB: d3ttta1, d3tttb1, d3tttc1, d3tttd1 automated match to d1p80a1 complexed with hem

   3. Domains for 3ttu:

      1. Domain d3ttua2: 3ttu A:598-753 [233730] Other proteins in same PDB: d3ttua1, d3ttub1 automated match to d1p80a1 complexed with hem

      2. Domain d3ttub2: 3ttu B:598-753 [233728] Other proteins in same PDB: d3ttua1, d3ttub1 automated match to d1p80a1 complexed with hem

   4. Domains for 3ttv:

      1. Domain d3ttva2: 3ttv A:598-753 [233732] Other proteins in same PDB: d3ttva1, d3ttvb1, d3ttvc1 automated match to d1p80a1 complexed with hem

      2. Domain d3ttvb2: 3ttv B:598-753 [233736] Other proteins in same PDB: d3ttva1, d3ttvb1, d3ttvc1 automated match to d1p80a1 complexed with hem

      3. Domain d3ttvc2: 3ttv C:598-753 [233735] Other proteins in same PDB: d3ttva1, d3ttvb1, d3ttvc1 automated match to d1p80a1 complexed with hem

   5. Domain for 3ttw:

      • Domain d3ttwa2: 3ttw A:598-753 [233738] Other proteins in same PDB: d3ttwa1 automated match to d1p80a1 complexed with hem

   6. Domain for 3ttx:

      • Domain d3ttxa2: 3ttx A:598-753 [233740] Other proteins in same PDB: d3ttxa1 automated match to d1p80a1 complexed with hem

3. Escherichia coli [TaxId:83333] [226043] (12 PDB entries)

   1. Domains for 3p9p:

      1. Domain d3p9pa2: 3p9p A:598-753 [233197] Other proteins in same PDB: d3p9pa1, d3p9pb1, d3p9pc1, d3p9pd1 automated match to d1p80a1 complexed with hdd, hde, hem

      2. Domain d3p9pb2: 3p9p B:598-753 [233198] Other proteins in same PDB: d3p9pa1, d3p9pb1, d3p9pc1, d3p9pd1 automated match to d1p80a1 complexed with hdd, hde, hem

      3. Domain d3p9pc2: 3p9p C:598-753 [233202] Other proteins in same PDB: d3p9pa1, d3p9pb1, d3p9pc1, d3p9pd1 automated match to d1p80a1 complexed with hdd, hde, hem

      4. Domain d3p9pd2: 3p9p D:598-753 [233196] Other proteins in same PDB: d3p9pa1, d3p9pb1, d3p9pc1, d3p9pd1 automated match to d1p80a1 complexed with hdd, hde, hem

   2. Domains for 3p9q:

      1. Domain d3p9qa2: 3p9q A:598-753 [233201] Other proteins in same PDB: d3p9qa1, d3p9qb1, d3p9qc1, d3p9qd1 automated match to d1p80a1 complexed with h2s, hdd, hde

      2. Domain d3p9qb2: 3p9q B:598-753 [233194] Other proteins in same PDB: d3p9qa1, d3p9qb1, d3p9qc1, d3p9qd1 automated match to d1p80a1 complexed with h2s, hdd, hde

      3. Domain d3p9qc2: 3p9q C:598-753 [233204] Other proteins in same PDB: d3p9qa1, d3p9qb1, d3p9qc1, d3p9qd1 automated match to d1p80a1 complexed with h2s, hdd, hde

      4. Domain d3p9qd2: 3p9q D:598-753 [233203] Other proteins in same PDB: d3p9qa1, d3p9qb1, d3p9qc1, d3p9qd1 automated match to d1p80a1 complexed with h2s, hdd, hde

   3. Domains for 3p9r:

      1. Domain d3p9ra2: 3p9r A:598-753 [233200] Other proteins in same PDB: d3p9ra1, d3p9rb1, d3p9rc1, d3p9rd1 automated match to d1p80a1 complexed with hdd

      2. Domain d3p9rb2: 3p9r B:598-753 [233199] Other proteins in same PDB: d3p9ra1, d3p9rb1, d3p9rc1, d3p9rd1 automated match to d1p80a1 complexed with hdd

      3. Domain d3p9rc2: 3p9r C:598-753 [233195] Other proteins in same PDB: d3p9ra1, d3p9rb1, d3p9rc1, d3p9rd1 automated match to d1p80a1 complexed with hdd

      4. Domain d3p9rd2: 3p9r D:598-753 [233205] Other proteins in same PDB: d3p9ra1, d3p9rb1, d3p9rc1, d3p9rd1 automated match to d1p80a1 complexed with hdd

   4. Domain for 3p9s:

      • Domain d3p9sa2: 3p9s A:598-753 [233193] Other proteins in same PDB: d3p9sa1 automated match to d1p80a1 complexed with hdd, hde

   5. Domains for 4enp:

      1. Domain d4enpa2: 4enp A:598-753 [220690] Other proteins in same PDB: d4enpa1, d4enpb1, d4enpc1, d4enpd1 automated match to d1p80a1 complexed with hem

      2. Domain d4enpb2: 4enp B:598-753 [220692] Other proteins in same PDB: d4enpa1, d4enpb1, d4enpc1, d4enpd1 automated match to d1p80a1 complexed with hem

      3. Domain d4enpc2: 4enp C:598-753 [220694] Other proteins in same PDB: d4enpa1, d4enpb1, d4enpc1, d4enpd1 automated match to d1p80a1 complexed with hem

      4. Domain d4enpd2: 4enp D:598-753 [220696] Other proteins in same PDB: d4enpa1, d4enpb1, d4enpc1, d4enpd1 automated match to d1p80a1 complexed with hem

   6. Domains for 4enq:

      1. Domain d4enqa2: 4enq A:598-753 [220698] Other proteins in same PDB: d4enqa1, d4enqb1, d4enqc1, d4enqd1 automated match to d1p80a1 complexed with hdd

      2. Domain d4enqb2: 4enq B:598-753 [220700] Other proteins in same PDB: d4enqa1, d4enqb1, d4enqc1, d4enqd1 automated match to d1p80a1 complexed with hdd

      3. Domain d4enqc2: 4enq C:598-753 [220702] Other proteins in same PDB: d4enqa1, d4enqb1, d4enqc1, d4enqd1 automated match to d1p80a1 complexed with hdd

      4. Domain d4enqd2: 4enq D:598-753 [220704] Other proteins in same PDB: d4enqa1, d4enqb1, d4enqc1, d4enqd1 automated match to d1p80a1 complexed with hdd

   7. Domains for 4enr:

      1. Domain d4enra2: 4enr A:598-753 [220706] Other proteins in same PDB: d4enra1, d4enrb1, d4enrc1, d4enrd1 automated match to d1p80a1 complexed with hem

      2. Domain d4enrb2: 4enr B:598-753 [220708] Other proteins in same PDB: d4enra1, d4enrb1, d4enrc1, d4enrd1 automated match to d1p80a1 complexed with hem

      3. Domain d4enrc2: 4enr C:598-753 [220710] Other proteins in same PDB: d4enra1, d4enrb1, d4enrc1, d4enrd1 automated match to d1p80a1 complexed with hem

      4. Domain d4enrd2: 4enr D:598-753 [220712] Other proteins in same PDB: d4enra1, d4enrb1, d4enrc1, d4enrd1 automated match to d1p80a1 complexed with hem

   8. Domains for 4ens:

      1. Domain d4ensa2: 4ens A:598-753 [220714] Other proteins in same PDB: d4ensa1, d4ensb1, d4ensc1, d4ensd1 automated match to d1p80a1 complexed with hdd, hem

      2. Domain d4ensb2: 4ens B:598-753 [220716] Other proteins in same PDB: d4ensa1, d4ensb1, d4ensc1, d4ensd1 automated match to d1p80a1 complexed with hdd, hem

      3. Domain d4ensc2: 4ens C:598-753 [220718] Other proteins in same PDB: d4ensa1, d4ensb1, d4ensc1, d4ensd1 automated match to d1p80a1 complexed with hdd, hem

      4. Domain d4ensd2: 4ens D:598-753 [220720] Other proteins in same PDB: d4ensa1, d4ensb1, d4ensc1, d4ensd1 automated match to d1p80a1 complexed with hdd, hem

   9. Domains for 4ent:

      1. Domain d4enta2: 4ent A:598-753 [220722] Other proteins in same PDB: d4enta1, d4entb1, d4entc1, d4entd1 automated match to d1p80a1 complexed with hdd, hem

      2. Domain d4entb2: 4ent B:598-753 [220724] Other proteins in same PDB: d4enta1, d4entb1, d4entc1, d4entd1 automated match to d1p80a1 complexed with hdd, hem

      3. Domain d4entc2: 4ent C:598-753 [220726] Other proteins in same PDB: d4enta1, d4entb1, d4entc1, d4entd1 automated match to d1p80a1 complexed with hdd, hem

      4. Domain d4entd2: 4ent D:598-753 [220728] Other proteins in same PDB: d4enta1, d4entb1, d4entc1, d4entd1 automated match to d1p80a1 complexed with hdd, hem

   10. Domains for 4enu:

       1. Domain d4enua2: 4enu A:598-753 [220730] Other proteins in same PDB: d4enua1, d4enub1, d4enuc1, d4enud1 automated match to d1p80a1 complexed with hdd

       2. Domain d4enub2: 4enu B:598-753 [220732] Other proteins in same PDB: d4enua1, d4enub1, d4enuc1, d4enud1 automated match to d1p80a1 complexed with hdd

       3. Domain d4enuc2: 4enu C:598-753 [220734] Other proteins in same PDB: d4enua1, d4enub1, d4enuc1, d4enud1 automated match to d1p80a1 complexed with hdd

       4. Domain d4enud2: 4enu D:598-753 [220736] Other proteins in same PDB: d4enua1, d4enub1, d4enuc1, d4enud1 automated match to d1p80a1 complexed with hdd

   11. Domains for 4env:

       1. Domain d4enva2: 4env A:598-753 [220738] Other proteins in same PDB: d4enva1, d4envb1, d4envc1, d4envd1 automated match to d1p80a1 complexed with hdd, hem

       2. Domain d4envb2: 4env B:598-753 [220740] Other proteins in same PDB: d4enva1, d4envb1, d4envc1, d4envd1 automated match to d1p80a1 complexed with hdd, hem

       3. Domain d4envc2: 4env C:598-753 [220742] Other proteins in same PDB: d4enva1, d4envb1, d4envc1, d4envd1 automated match to d1p80a1 complexed with hdd, hem

       4. Domain d4envd2: 4env D:598-753 [220744] Other proteins in same PDB: d4enva1, d4envb1, d4envc1, d4envd1 automated match to d1p80a1 complexed with hdd, hem

   12. Domains for 4enw:

       1. Domain d4enwa2: 4enw A:598-753 [220746] Other proteins in same PDB: d4enwa1, d4enwb1, d4enwc1, d4enwd1 automated match to d1p80a1 complexed with hdd

       2. Domain d4enwb2: 4enw B:598-753 [220748] Other proteins in same PDB: d4enwa1, d4enwb1, d4enwc1, d4enwd1 automated match to d1p80a1 complexed with hdd

       3. Domain d4enwc2: 4enw C:598-753 [220750] Other proteins in same PDB: d4enwa1, d4enwb1, d4enwc1, d4enwd1 automated match to d1p80a1 complexed with hdd

       4. Domain d4enwd2: 4enw D:598-753 [220752] Other proteins in same PDB: d4enwa1, d4enwb1, d4enwc1, d4enwd1 automated match to d1p80a1 complexed with hdd

4. Fission yeast (Schizosaccharomyces pombe) [TaxId:4896] [226442] (3 PDB entries)

   1. Domains for 4gdh:

      1. Domain d4gdha_: 4gdh A: [221851] automated match to d2ab0a1 complexed with edo, mg

      2. Domain d4gdhb_: 4gdh B: [221852] automated match to d2ab0a1 complexed with edo, mg

      3. Domain d4gdhc_: 4gdh C: [221853] automated match to d2ab0a1 complexed with edo, mg

      4. Domain d4gdhd_: 4gdh D: [221854] automated match to d2ab0a1 complexed with edo, mg

   2. Domains for 4ge0:

      1. Domain d4ge0a_: 4ge0 A: [221859] automated match to d2ab0a1 complexed with edo, mg; mutant

      2. Domain d4ge0b_: 4ge0 B: [221860] automated match to d2ab0a1 complexed with edo, mg; mutant

      3. Domain d4ge0c_: 4ge0 C: [221861] automated match to d2ab0a1 complexed with edo, mg; mutant

      4. Domain d4ge0d_: 4ge0 D: [221862] automated match to d2ab0a1 complexed with edo, mg; mutant

   3. Domains for 4ge3:

      1. Domain d4ge3a_: 4ge3 A: [221863] automated match to d2ab0a1 complexed with edo, mg; mutant

      2. Domain d4ge3b_: 4ge3 B: [221864] automated match to d2ab0a1 complexed with edo, mg; mutant

      3. Domain d4ge3c_: 4ge3 C: [221865] automated match to d2ab0a1 complexed with edo, mg; mutant

      4. Domain d4ge3d_: 4ge3 D: [221866] automated match to d2ab0a1 complexed with edo, mg; mutant

5. Fruit fly (Drosophila melanogaster) [TaxId:7227] [195790] (1 PDB entry)

   • Domains for 4e08:

     1. Domain d4e08a_: 4e08 A: [195791] automated match to d3b38a_ complexed with so4

     2. Domain d4e08b_: 4e08 B: [195792] automated match to d3b38a_ complexed with so4

6. Fungus (Coccidioides immitis) [TaxId:5501] [189368] (1 PDB entry)

   • Domain for 3n7t:

     • Domain d3n7ta_: 3n7t A: [181978] automated match to d1qvvb_ complexed with cl, edo, po4

7. Malaria parasite (Plasmodium falciparum) [TaxId:5833] [186940] (1 PDB entry)

   • Domain for 2abw:

     • Domain d2abwb_: 2abw B: [126536] Other proteins in same PDB: d2abwa1 automated match to d1q7ra_ complexed with pg4

8. Methanocaldococcus jannaschii [TaxId:243232] [188241] (1 PDB entry)

   • Domain for 2ywj:

     • Domain d2ywja_: 2ywj A: [170889] automated match to d1q7ra_

9. Salmonella enterica [TaxId:99287] [226648] (1 PDB entry)

   • Domains for 4k2h:

     1. Domain d4k2ha_: 4k2h A: [224104] automated match to d3b36a_ complexed with zn; mutant

     2. Domain d4k2hb_: 4k2h B: [224105] automated match to d3b36a_ complexed with zn; mutant

     3. Domain d4k2hc_: 4k2h C: [224106] automated match to d3b36a_ complexed with zn; mutant

     4. Domain d4k2hd_: 4k2h D: [224107] automated match to d3b36a_ complexed with zn; mutant

     5. Domain d4k2he_: 4k2h E: [224108] automated match to d3b36a_ complexed with zn; mutant

     6. Domain d4k2hf_: 4k2h F: [224109] automated match to d3b36a_ complexed with zn; mutant

     7. Domain d4k2hg_: 4k2h G: [224110] automated match to d3b36a_ complexed with zn; mutant

     8. Domain d4k2hh_: 4k2h H: [224111] automated match to d3b36a_ complexed with zn; mutant

     9. Domain d4k2hi_: 4k2h I: [224112] automated match to d3b36a_ complexed with zn; mutant

     10. Domain d4k2hj_: 4k2h J: [224113] automated match to d3b36a_ complexed with zn; mutant

     11. Domain d4k2hk_: 4k2h K: [224114] automated match to d3b36a_ complexed with zn; mutant

     12. Domain d4k2hl_: 4k2h L: [224115] automated match to d3b36a_ complexed with zn; mutant

     13. Domain d4k2hm_: 4k2h M: [224116] automated match to d3b36a_ complexed with zn; mutant

     14. Domain d4k2hn_: 4k2h N: [224117] automated match to d3b36a_ complexed with zn; mutant

10. Vibrio cholerae [TaxId:243277] [189482] (2 PDB entries)

    1. Domains for 3ot1:

       1. Domain d3ot1a_: 3ot1 A: [183276] automated match to d2ab0a1 complexed with cl, na

       2. Domain d3ot1b_: 3ot1 B: [183277] automated match to d2ab0a1 complexed with cl, na

    2. Domains for 4gud:

       1. Domain d4guda_: 4gud A: [222167] automated match to d1kxjb_ complexed with 1pe, edo, gol, peg

       2. Domain d4gudb_: 4gud B: [222168] automated match to d1kxjb_ complexed with 1pe, edo, gol, peg

More info for Protein automated matches from c.23.16.0: automated matches

Timeline for Protein automated matches from c.23.16.0: automated matches:

• Protein automated matches from c.23.16.0: automated matches first appeared in SCOPe 2.01
  
• Protein automated matches from c.23.16.0: automated matches appears in SCOPe 2.02
  
• Protein automated matches from c.23.16.0: automated matches appears in SCOPe 2.04
  
• Protein automated matches from c.23.16.0: automated matches appears in the current release, SCOPe 2.08