PDB entry 4k2h

View 4k2h on RCSB PDB site
Description: Crystal structure of C103A mutant of DJ-1 superfamily protein STM1931 from Salmonella typhimurium
Class: unknown function
Keywords: Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, Unknown Function
Deposited on 2013-04-09, released 2013-04-24
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-05-01, with a file datestamp of 2013-04-26.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.173
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2ha_
  • Chain 'B':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hb_
  • Chain 'C':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hc_
  • Chain 'D':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • expression tag (2)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hd_
  • Chain 'E':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2he_
  • Chain 'F':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hf_
  • Chain 'G':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • expression tag (2)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hg_
  • Chain 'H':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hh_
  • Chain 'I':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hi_
  • Chain 'J':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hj_
  • Chain 'K':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hk_
  • Chain 'L':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hl_
  • Chain 'M':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hm_
  • Chain 'N':
    Compound: Intracellular protease/amidase
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:99287]
    Gene: araH, STM1931
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8ZNU7 (3-187)
      • engineered mutation (105)
    Domains in SCOPe 2.03: d4k2hn_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4k2hA (A:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hA (A:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4k2hB (B:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hB (B:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4k2hC (C:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hC (C:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4k2hD (D:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hD (D:)
    amkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlser
    qqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgr
    ryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqae
    hiyypw
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4k2hE (E:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hE (E:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4k2hF (F:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hF (F:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4k2hG (G:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hG (G:)
    amkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlser
    qqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgr
    ryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqae
    hiyypw
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4k2hH (H:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hH (H:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'I':
    Sequence, based on SEQRES records: (download)
    >4k2hI (I:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hI (I:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'J':
    Sequence, based on SEQRES records: (download)
    >4k2hJ (J:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hJ (J:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >4k2hK (K:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hK (K:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >4k2hL (L:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hL (L:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'M':
    Sequence, based on SEQRES records: (download)
    >4k2hM (M:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hM (M:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw
    

  • Chain 'N':
    Sequence, based on SEQRES records: (download)
    >4k2hN (N:)
    snamkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstls
    erqqalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllk
    grryvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreq
    aehiyypw
    

    Sequence, based on observed residues (ATOM records): (download)
    >4k2hN (N:)
    mkkvavllapgfeeaeaivtldilrrlhidvetlacaesravvsyhdipmvadstlserq
    qalfdavvlpggpqgsanlaanpaviafvarhdaagklicpiasaaarvlgahgllkgrr
    yvcsgdlwkavpegvyvdapvvedgnlisgkglghvfdfaltlsarllgddapvreqaeh
    iyypw