Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1584360Fold c.14: ClpP/crotonase [52095] (1 superfamily)
    core: 4 turns of (beta-beta-alpha)n superhelix
  4. 1584361Superfamily c.14.1: ClpP/crotonase [52096] (5 families) (S)
  5. Family c.14.1.1: Clp protease, ClpP subunit [52097] (2 proteins)
    automatically mapped to Pfam PF00574
  6. Protein automated matches [190149] (7 species)
    not a true protein

Species:

  1. 1584528Bacillus subtilis [TaxId:1423] [189283] (5 PDB entries)
    1. Domains for 3ktg:
      1. 1584536Domain d3ktga_: 3ktg A: [179660]
        automated match to d1tyfa_
      2. 1584537Domain d3ktgb_: 3ktg B: [179661]
        automated match to d1tyfa_
      3. 1584538Domain d3ktgc_: 3ktg C: [179662]
        automated match to d1tyfa_
      4. 1584539Domain d3ktgd_: 3ktg D: [179663]
        automated match to d1tyfa_
      5. 1584540Domain d3ktge_: 3ktg E: [179664]
        automated match to d1tyfa_
      6. 1584541Domain d3ktgf_: 3ktg F: [179665]
        automated match to d1tyfa_
      7. 1584542Domain d3ktgg_: 3ktg G: [179666]
        automated match to d1tyfa_
    2. Domains for 3kth:
      1. 1584564Domain d3ktha_: 3kth A: [247286]
        automated match to d3ktga_
      2. 1584565Domain d3kthb_: 3kth B: [247287]
        automated match to d3ktga_
      3. 1584566Domain d3kthc_: 3kth C: [247288]
        automated match to d3ktga_
      4. 1584567Domain d3kthd_: 3kth D: [247289]
        automated match to d3ktga_
      5. 1584568Domain d3kthe_: 3kth E: [247290]
        automated match to d3ktga_
      6. 1584569Domain d3kthf_: 3kth F: [247291]
        automated match to d3ktga_
      7. 1584570Domain d3kthg_: 3kth G: [247292]
        automated match to d3ktga_
    3. Domains for 3kti:
      1. 1584529Domain d3ktia_: 3kti A: [179667]
        automated match to d1tyfa_
        complexed with dms, nhe
      2. 1584530Domain d3ktib_: 3kti B: [179668]
        automated match to d1tyfa_
        complexed with dms, nhe
      3. 1584531Domain d3ktic_: 3kti C: [179669]
        automated match to d1tyfa_
        complexed with dms, nhe
      4. 1584532Domain d3ktid_: 3kti D: [179670]
        automated match to d1tyfa_
        complexed with dms, nhe
      5. 1584533Domain d3ktie_: 3kti E: [179671]
        automated match to d1tyfa_
        complexed with dms, nhe
      6. 1584534Domain d3ktif_: 3kti F: [179672]
        automated match to d1tyfa_
        complexed with dms, nhe
      7. 1584535Domain d3ktig_: 3kti G: [179673]
        automated match to d1tyfa_
        complexed with dms, nhe
    4. Domains for 3ktj:
      1. 1584543Domain d3ktja_: 3ktj A: [179674]
        automated match to d1tyfa_
        complexed with nhe
      2. 1584544Domain d3ktjb_: 3ktj B: [179675]
        automated match to d1tyfa_
        complexed with nhe
      3. 1584545Domain d3ktjc_: 3ktj C: [179676]
        automated match to d1tyfa_
        complexed with nhe
      4. 1584546Domain d3ktjd_: 3ktj D: [179677]
        automated match to d1tyfa_
        complexed with nhe
      5. 1584547Domain d3ktje_: 3ktj E: [179678]
        automated match to d1tyfa_
        complexed with nhe
      6. 1584548Domain d3ktjf_: 3ktj F: [179679]
        automated match to d1tyfa_
        complexed with nhe
      7. 1584549Domain d3ktjg_: 3ktj G: [179680]
        automated match to d1tyfa_
        complexed with nhe
    5. Domains for 3ktk:
      1. 1584550Domain d3ktka_: 3ktk A: [179681]
        automated match to d1tyfa_
      2. 1584551Domain d3ktkb_: 3ktk B: [179682]
        automated match to d1tyfa_
      3. 1584552Domain d3ktkc_: 3ktk C: [179683]
        automated match to d1tyfa_
      4. 1584553Domain d3ktkd_: 3ktk D: [179684]
        automated match to d1tyfa_
      5. 1584554Domain d3ktke_: 3ktk E: [179685]
        automated match to d1tyfa_
      6. 1584555Domain d3ktkf_: 3ktk F: [179686]
        automated match to d1tyfa_
      7. 1584556Domain d3ktkg_: 3ktk G: [179687]
        automated match to d1tyfa_
      8. 1584557Domain d3ktkh_: 3ktk H: [179688]
        automated match to d1tyfa_
      9. 1584558Domain d3ktki_: 3ktk I: [179689]
        automated match to d1tyfa_
      10. 1584559Domain d3ktkj_: 3ktk J: [179690]
        automated match to d1tyfa_
      11. 1584560Domain d3ktkk_: 3ktk K: [179691]
        automated match to d1tyfa_
      12. 1584561Domain d3ktkl_: 3ktk L: [179692]
        automated match to d1tyfa_
      13. 1584562Domain d3ktkm_: 3ktk M: [179693]
        automated match to d1tyfa_
      14. 1584563Domain d3ktkn_: 3ktk N: [179694]
        automated match to d1tyfa_
  2. 1584571Coxiella burnetii [TaxId:360115] [189606] (1 PDB entry)
  3. Escherichia coli K-12 [TaxId:83333] [196414] (1 PDB entry)
  4. 1584613Escherichia coli [TaxId:562] [186874] (3 PDB entries)
    1. Domains for 1yg6:
      1. 1584614Domain d1yg6a_: 1yg6 A: [123100]
        automated match to d1tyfa_
        complexed with mpd
      2. 1584615Domain d1yg6b_: 1yg6 B: [123101]
        automated match to d1tyfa_
        complexed with mpd
      3. 1584616Domain d1yg6c_: 1yg6 C: [123102]
        automated match to d1tyfa_
        complexed with mpd
      4. 1584617Domain d1yg6d_: 1yg6 D: [123103]
        automated match to d1tyfa_
        complexed with mpd
      5. 1584618Domain d1yg6e_: 1yg6 E: [123104]
        automated match to d1tyfa_
        complexed with mpd
      6. 1584619Domain d1yg6f_: 1yg6 F: [123105]
        automated match to d1tyfa_
        complexed with mpd
      7. 1584620Domain d1yg6g_: 1yg6 G: [123106]
        automated match to d1tyfa_
        complexed with mpd
      8. 1584621Domain d1yg6h_: 1yg6 H: [123107]
        automated match to d1tyfa_
        complexed with mpd
      9. 1584622Domain d1yg6i_: 1yg6 I: [123108]
        automated match to d1tyfa_
        complexed with mpd
      10. 1584623Domain d1yg6j_: 1yg6 J: [123109]
        automated match to d1tyfa_
        complexed with mpd
      11. 1584624Domain d1yg6k_: 1yg6 K: [123110]
        automated match to d1tyfa_
        complexed with mpd
      12. 1584625Domain d1yg6l_: 1yg6 L: [123111]
        automated match to d1tyfa_
        complexed with mpd
      13. 1584626Domain d1yg6m_: 1yg6 M: [123112]
        automated match to d1tyfa_
        complexed with mpd
      14. 1584627Domain d1yg6n_: 1yg6 N: [123113]
        automated match to d1tyfa_
        complexed with mpd
    2. Domains for 1yg8:
      1. 1584642Domain d1yg8a_: 1yg8 A: [123114]
        automated match to d1tyfa_
      2. 1584643Domain d1yg8b_: 1yg8 B: [123115]
        automated match to d1tyfa_
      3. 1584644Domain d1yg8c_: 1yg8 C: [123116]
        automated match to d1tyfa_
      4. 1584645Domain d1yg8d_: 1yg8 D: [123117]
        automated match to d1tyfa_
      5. 1584646Domain d1yg8e_: 1yg8 E: [123118]
        automated match to d1tyfa_
      6. 1584647Domain d1yg8f_: 1yg8 F: [123119]
        automated match to d1tyfa_
      7. 1584648Domain d1yg8g_: 1yg8 G: [123120]
        automated match to d1tyfa_
      8. 1584649Domain d1yg8h_: 1yg8 H: [123121]
        automated match to d1tyfa_
      9. 1584650Domain d1yg8i_: 1yg8 I: [123122]
        automated match to d1tyfa_
      10. 1584651Domain d1yg8j_: 1yg8 J: [123123]
        automated match to d1tyfa_
      11. 1584652Domain d1yg8k_: 1yg8 K: [123124]
        automated match to d1tyfa_
      12. 1584653Domain d1yg8l_: 1yg8 L: [123125]
        automated match to d1tyfa_
      13. 1584654Domain d1yg8m_: 1yg8 M: [123126]
        automated match to d1tyfa_
      14. 1584655Domain d1yg8n_: 1yg8 N: [123127]
        automated match to d1tyfa_
      15. 1584656Domain d1yg8o_: 1yg8 O: [123128]
        automated match to d1tyfa_
      16. 1584657Domain d1yg8p_: 1yg8 P: [123129]
        automated match to d1tyfa_
      17. 1584658Domain d1yg8q_: 1yg8 Q: [123130]
        automated match to d1tyfa_
      18. 1584659Domain d1yg8r_: 1yg8 R: [123131]
        automated match to d1tyfa_
      19. 1584660Domain d1yg8s_: 1yg8 S: [123132]
        automated match to d1tyfa_
      20. 1584661Domain d1yg8t_: 1yg8 T: [123133]
        automated match to d1tyfa_
      21. 1584662Domain d1yg8u_: 1yg8 U: [123134]
        automated match to d1tyfa_
      22. 1584663Domain d1yg8v_: 1yg8 V: [123135]
        automated match to d1tyfa_
      23. 1584664Domain d1yg8w_: 1yg8 W: [123136]
        automated match to d1tyfa_
      24. 1584665Domain d1yg8x_: 1yg8 X: [123137]
        automated match to d1tyfa_
      25. 1584666Domain d1yg8y_: 1yg8 Y: [123138]
        automated match to d1tyfa_
      26. 1584667Domain d1yg8z_: 1yg8 Z: [123139]
        automated match to d1tyfa_
    3. Domains for 2fzs:
      1. 1584628Domain d2fzsa_: 2fzs A: [134462]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      2. 1584629Domain d2fzsb_: 2fzs B: [134463]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      3. 1584630Domain d2fzsc_: 2fzs C: [134464]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      4. 1584631Domain d2fzsd_: 2fzs D: [134465]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      5. 1584632Domain d2fzse_: 2fzs E: [134466]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      6. 1584633Domain d2fzsf_: 2fzs F: [134467]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      7. 1584634Domain d2fzsg_: 2fzs G: [134468]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      8. 1584635Domain d2fzsh_: 2fzs H: [134469]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      9. 1584636Domain d2fzsi_: 2fzs I: [134470]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      10. 1584637Domain d2fzsj_: 2fzs J: [134471]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      11. 1584638Domain d2fzsk_: 2fzs K: [134472]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      12. 1584639Domain d2fzsl_: 2fzs L: [134473]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      13. 1584640Domain d2fzsm_: 2fzs M: [134474]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      14. 1584641Domain d2fzsn_: 2fzs N: [134475]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
  5. 1584668Francisella tularensis [TaxId:177416] [189492] (1 PDB entry)
  6. 1584676Listeria monocytogenes [TaxId:169963] [197321] (1 PDB entry)
  7. 1584684Staphylococcus aureus [TaxId:93061] [189958] (4 PDB entries)
    1. Domains for 3qwd:
      1. 1584685Domain d3qwda_: 3qwd A: [184663]
        automated match to d1tyfa_
        complexed with cl
      2. 1584686Domain d3qwdb_: 3qwd B: [184664]
        automated match to d1tyfa_
        complexed with cl
      3. 1584687Domain d3qwdc_: 3qwd C: [184665]
        automated match to d1tyfa_
        complexed with cl
      4. 1584688Domain d3qwdd_: 3qwd D: [184666]
        automated match to d1tyfa_
        complexed with cl
      5. 1584689Domain d3qwde_: 3qwd E: [184667]
        automated match to d1tyfa_
        complexed with cl
      6. 1584690Domain d3qwdf_: 3qwd F: [184668]
        automated match to d1tyfa_
        complexed with cl
      7. 1584691Domain d3qwdg_: 3qwd G: [184669]
        automated match to d1tyfa_
        complexed with cl
      8. 1584692Domain d3qwdh_: 3qwd H: [184670]
        automated match to d1tyfa_
        complexed with cl
      9. 1584693Domain d3qwdi_: 3qwd I: [184671]
        automated match to d1tyfa_
        complexed with cl
      10. 1584694Domain d3qwdj_: 3qwd J: [184672]
        automated match to d1tyfa_
        complexed with cl
      11. 1584695Domain d3qwdk_: 3qwd K: [184673]
        automated match to d1tyfa_
        complexed with cl
      12. 1584696Domain d3qwdl_: 3qwd L: [184674]
        automated match to d1tyfa_
        complexed with cl
      13. 1584697Domain d3qwdm_: 3qwd M: [184675]
        automated match to d1tyfa_
        complexed with cl
      14. 1584698Domain d3qwdn_: 3qwd N: [184676]
        automated match to d1tyfa_
        complexed with cl
    2. Domains for 3v5e:
      1. 1584699Domain d3v5ea_: 3v5e A: [201160]
        automated match to d3qwda_
      2. 1584700Domain d3v5eb_: 3v5e B: [201161]
        automated match to d3qwda_
      3. 1584701Domain d3v5ec_: 3v5e C: [201162]
        automated match to d3qwda_
      4. 1584702Domain d3v5ed_: 3v5e D: [201163]
        automated match to d3qwda_
      5. 1584703Domain d3v5ee_: 3v5e E: [201164]
        automated match to d3qwda_
      6. 1584704Domain d3v5ef_: 3v5e F: [201165]
        automated match to d3qwda_
      7. 1584705Domain d3v5eg_: 3v5e G: [201166]
        automated match to d3qwda_
      8. 1584706Domain d3v5eh_: 3v5e H: [201167]
        automated match to d3qwda_
      9. 1584707Domain d3v5ei_: 3v5e I: [201168]
        automated match to d3qwda_
      10. 1584708Domain d3v5ej_: 3v5e J: [196045]
        automated match to d3qwdh_
      11. 1584709Domain d3v5ek_: 3v5e K: [196044]
        automated match to d3qwdh_
      12. 1584710Domain d3v5el_: 3v5e L: [201169]
        automated match to d3qwda_
      13. 1584711Domain d3v5em_: 3v5e M: [201170]
        automated match to d3qwda_
      14. 1584712Domain d3v5en_: 3v5e N: [201171]
        automated match to d3qwda_
    3. Domains for 3v5i:
      1. 1584720Domain d3v5ia_: 3v5i A: [201172]
        automated match to d3v5iz_
        mutant
      2. 1584721Domain d3v5ib_: 3v5i B: [201173]
        automated match to d3v5iz_
        mutant
      3. 1584722Domain d3v5ic_: 3v5i C: [201174]
        automated match to d3v5iz_
        mutant
      4. 1584723Domain d3v5id_: 3v5i D: [201175]
        automated match to d3v5iz_
        mutant
      5. 1584724Domain d3v5ie_: 3v5i E: [201176]
        automated match to d3v5iz_
        mutant
      6. 1584725Domain d3v5if_: 3v5i F: [201177]
        automated match to d3v5iz_
        mutant
      7. 1584726Domain d3v5ig_: 3v5i G: [201178]
        automated match to d3v5iz_
        mutant
      8. 1584727Domain d3v5ih_: 3v5i H: [201179]
        automated match to d3v5iz_
        mutant
      9. 1584728Domain d3v5ii_: 3v5i I: [201180]
        automated match to d3v5iz_
        mutant
      10. 1584729Domain d3v5ij_: 3v5i J: [201181]
        automated match to d3v5iz_
        mutant
      11. 1584730Domain d3v5ik_: 3v5i K: [201182]
        automated match to d3v5iz_
        mutant
      12. 1584731Domain d3v5il_: 3v5i L: [201183]
        automated match to d3v5iz_
        mutant
      13. 1584732Domain d3v5im_: 3v5i M: [201184]
        automated match to d3v5iz_
        mutant
      14. 1584733Domain d3v5in_: 3v5i N: [201185]
        automated match to d3v5iz_
        mutant
      15. 1584734Domain d3v5io_: 3v5i O: [201186]
        automated match to d3v5iz_
        mutant
      16. 1584735Domain d3v5ip_: 3v5i P: [201187]
        automated match to d3v5iz_
        mutant
      17. 1584736Domain d3v5iq_: 3v5i Q: [201188]
        automated match to d3v5iz_
        mutant
      18. 1584737Domain d3v5ir_: 3v5i R: [201189]
        automated match to d3v5iz_
        mutant
      19. 1584738Domain d3v5is_: 3v5i S: [201190]
        automated match to d3v5iz_
        mutant
      20. 1584739Domain d3v5it_: 3v5i T: [201191]
        automated match to d3v5iz_
        mutant
      21. 1584740Domain d3v5iu_: 3v5i U: [201192]
        automated match to d3v5iz_
        mutant
      22. 1584741Domain d3v5iv_: 3v5i V: [201193]
        automated match to d3v5iz_
        mutant
      23. 1584742Domain d3v5iw_: 3v5i W: [201194]
        automated match to d3v5iz_
        mutant
      24. 1584743Domain d3v5ix_: 3v5i X: [201195]
        automated match to d3v5iz_
        mutant
      25. 1584744Domain d3v5iy_: 3v5i Y: [201196]
        automated match to d3v5iz_
        mutant
      26. 1584745Domain d3v5iz_: 3v5i Z: [196043]
        automated match to d3qwdh_
        mutant
    4. Domains for 4mxi:
      1. 1584713Domain d4mxia_: 4mxi A: [228553]
        automated match to d3qwdc_
      2. 1584714Domain d4mxib_: 4mxi B: [235691]
        automated match to d4mxid_
      3. 1584715Domain d4mxic_: 4mxi C: [235694]
        automated match to d4mxia_
      4. 1584716Domain d4mxid_: 4mxi D: [228551]
        automated match to d3qwdc_
      5. 1584717Domain d4mxie_: 4mxi E: [228552]
        automated match to d3qwdc_
      6. 1584718Domain d4mxif_: 4mxi F: [235693]
        automated match to d4mxid_
      7. 1584719Domain d4mxig_: 4mxi G: [235692]
        automated match to d4mxid_

More info for Protein automated matches from c.14.1.1: Clp protease, ClpP subunit

Timeline for Protein automated matches from c.14.1.1: Clp protease, ClpP subunit: