Lineage for Protein: automated matches

  1. Root: SCOPe 2.01
  2. 968085Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 980706Fold c.14: ClpP/crotonase [52095] (1 superfamily)
    core: 4 turns of (beta-beta-alpha)n superhelix
  4. 980707Superfamily c.14.1: ClpP/crotonase [52096] (5 families) (S)
  5. 980708Family c.14.1.1: Clp protease, ClpP subunit [52097] (2 proteins)
  6. 980845Protein automated matches [190149] (5 species)
    not a true protein

Species:

  1. 980846Bacillus subtilis [TaxId:1423] [189283] (4 PDB entries)
    1. Domains for 3ktg:
      1. 980854Domain d3ktga_: 3ktg A: [179660]
        automated match to d1tyfa_
      2. 980855Domain d3ktgb_: 3ktg B: [179661]
        automated match to d1tyfa_
      3. 980856Domain d3ktgc_: 3ktg C: [179662]
        automated match to d1tyfa_
      4. 980857Domain d3ktgd_: 3ktg D: [179663]
        automated match to d1tyfa_
      5. 980858Domain d3ktge_: 3ktg E: [179664]
        automated match to d1tyfa_
      6. 980859Domain d3ktgf_: 3ktg F: [179665]
        automated match to d1tyfa_
      7. 980860Domain d3ktgg_: 3ktg G: [179666]
        automated match to d1tyfa_
    2. Domains for 3kti:
      1. 980847Domain d3ktia_: 3kti A: [179667]
        automated match to d1tyfa_
        complexed with dms, nhe
      2. 980848Domain d3ktib_: 3kti B: [179668]
        automated match to d1tyfa_
        complexed with dms, nhe
      3. 980849Domain d3ktic_: 3kti C: [179669]
        automated match to d1tyfa_
        complexed with dms, nhe
      4. 980850Domain d3ktid_: 3kti D: [179670]
        automated match to d1tyfa_
        complexed with dms, nhe
      5. 980851Domain d3ktie_: 3kti E: [179671]
        automated match to d1tyfa_
        complexed with dms, nhe
      6. 980852Domain d3ktif_: 3kti F: [179672]
        automated match to d1tyfa_
        complexed with dms, nhe
      7. 980853Domain d3ktig_: 3kti G: [179673]
        automated match to d1tyfa_
        complexed with dms, nhe
    3. Domains for 3ktj:
      1. 980861Domain d3ktja_: 3ktj A: [179674]
        automated match to d1tyfa_
        complexed with nhe
      2. 980862Domain d3ktjb_: 3ktj B: [179675]
        automated match to d1tyfa_
        complexed with nhe
      3. 980863Domain d3ktjc_: 3ktj C: [179676]
        automated match to d1tyfa_
        complexed with nhe
      4. 980864Domain d3ktjd_: 3ktj D: [179677]
        automated match to d1tyfa_
        complexed with nhe
      5. 980865Domain d3ktje_: 3ktj E: [179678]
        automated match to d1tyfa_
        complexed with nhe
      6. 980866Domain d3ktjf_: 3ktj F: [179679]
        automated match to d1tyfa_
        complexed with nhe
      7. 980867Domain d3ktjg_: 3ktj G: [179680]
        automated match to d1tyfa_
        complexed with nhe
    4. Domains for 3ktk:
      1. 980868Domain d3ktka_: 3ktk A: [179681]
        automated match to d1tyfa_
      2. 980869Domain d3ktkb_: 3ktk B: [179682]
        automated match to d1tyfa_
      3. 980870Domain d3ktkc_: 3ktk C: [179683]
        automated match to d1tyfa_
      4. 980871Domain d3ktkd_: 3ktk D: [179684]
        automated match to d1tyfa_
      5. 980872Domain d3ktke_: 3ktk E: [179685]
        automated match to d1tyfa_
      6. 980873Domain d3ktkf_: 3ktk F: [179686]
        automated match to d1tyfa_
      7. 980874Domain d3ktkg_: 3ktk G: [179687]
        automated match to d1tyfa_
      8. 980875Domain d3ktkh_: 3ktk H: [179688]
        automated match to d1tyfa_
      9. 980876Domain d3ktki_: 3ktk I: [179689]
        automated match to d1tyfa_
      10. 980877Domain d3ktkj_: 3ktk J: [179690]
        automated match to d1tyfa_
      11. 980878Domain d3ktkk_: 3ktk K: [179691]
        automated match to d1tyfa_
      12. 980879Domain d3ktkl_: 3ktk L: [179692]
        automated match to d1tyfa_
      13. 980880Domain d3ktkm_: 3ktk M: [179693]
        automated match to d1tyfa_
      14. 980881Domain d3ktkn_: 3ktk N: [179694]
        automated match to d1tyfa_
  2. 980882Coxiella burnetii [TaxId:360115] [189606] (1 PDB entry)
  3. 980897Escherichia coli [TaxId:562] [186874] (3 PDB entries)
    1. Domains for 1yg6:
      1. 980898Domain d1yg6a_: 1yg6 A: [123100]
        automated match to d1tyfa_
        complexed with mpd
      2. 980899Domain d1yg6b_: 1yg6 B: [123101]
        automated match to d1tyfa_
        complexed with mpd
      3. 980900Domain d1yg6c_: 1yg6 C: [123102]
        automated match to d1tyfa_
        complexed with mpd
      4. 980901Domain d1yg6d_: 1yg6 D: [123103]
        automated match to d1tyfa_
        complexed with mpd
      5. 980902Domain d1yg6e_: 1yg6 E: [123104]
        automated match to d1tyfa_
        complexed with mpd
      6. 980903Domain d1yg6f_: 1yg6 F: [123105]
        automated match to d1tyfa_
        complexed with mpd
      7. 980904Domain d1yg6g_: 1yg6 G: [123106]
        automated match to d1tyfa_
        complexed with mpd
      8. 980905Domain d1yg6h_: 1yg6 H: [123107]
        automated match to d1tyfa_
        complexed with mpd
      9. 980906Domain d1yg6i_: 1yg6 I: [123108]
        automated match to d1tyfa_
        complexed with mpd
      10. 980907Domain d1yg6j_: 1yg6 J: [123109]
        automated match to d1tyfa_
        complexed with mpd
      11. 980908Domain d1yg6k_: 1yg6 K: [123110]
        automated match to d1tyfa_
        complexed with mpd
      12. 980909Domain d1yg6l_: 1yg6 L: [123111]
        automated match to d1tyfa_
        complexed with mpd
      13. 980910Domain d1yg6m_: 1yg6 M: [123112]
        automated match to d1tyfa_
        complexed with mpd
      14. 980911Domain d1yg6n_: 1yg6 N: [123113]
        automated match to d1tyfa_
        complexed with mpd
    2. Domains for 1yg8:
      1. 980926Domain d1yg8a_: 1yg8 A: [123114]
        automated match to d1tyfa_
      2. 980927Domain d1yg8b_: 1yg8 B: [123115]
        automated match to d1tyfa_
      3. 980928Domain d1yg8c_: 1yg8 C: [123116]
        automated match to d1tyfa_
      4. 980929Domain d1yg8d_: 1yg8 D: [123117]
        automated match to d1tyfa_
      5. 980930Domain d1yg8e_: 1yg8 E: [123118]
        automated match to d1tyfa_
      6. 980931Domain d1yg8f_: 1yg8 F: [123119]
        automated match to d1tyfa_
      7. 980932Domain d1yg8g_: 1yg8 G: [123120]
        automated match to d1tyfa_
      8. 980933Domain d1yg8h_: 1yg8 H: [123121]
        automated match to d1tyfa_
      9. 980934Domain d1yg8i_: 1yg8 I: [123122]
        automated match to d1tyfa_
      10. 980935Domain d1yg8j_: 1yg8 J: [123123]
        automated match to d1tyfa_
      11. 980936Domain d1yg8k_: 1yg8 K: [123124]
        automated match to d1tyfa_
      12. 980937Domain d1yg8l_: 1yg8 L: [123125]
        automated match to d1tyfa_
      13. 980938Domain d1yg8m_: 1yg8 M: [123126]
        automated match to d1tyfa_
      14. 980939Domain d1yg8n_: 1yg8 N: [123127]
        automated match to d1tyfa_
      15. 980940Domain d1yg8o_: 1yg8 O: [123128]
        automated match to d1tyfa_
      16. 980941Domain d1yg8p_: 1yg8 P: [123129]
        automated match to d1tyfa_
      17. 980942Domain d1yg8q_: 1yg8 Q: [123130]
        automated match to d1tyfa_
      18. 980943Domain d1yg8r_: 1yg8 R: [123131]
        automated match to d1tyfa_
      19. 980944Domain d1yg8s_: 1yg8 S: [123132]
        automated match to d1tyfa_
      20. 980945Domain d1yg8t_: 1yg8 T: [123133]
        automated match to d1tyfa_
      21. 980946Domain d1yg8u_: 1yg8 U: [123134]
        automated match to d1tyfa_
      22. 980947Domain d1yg8v_: 1yg8 V: [123135]
        automated match to d1tyfa_
      23. 980948Domain d1yg8w_: 1yg8 W: [123136]
        automated match to d1tyfa_
      24. 980949Domain d1yg8x_: 1yg8 X: [123137]
        automated match to d1tyfa_
      25. 980950Domain d1yg8y_: 1yg8 Y: [123138]
        automated match to d1tyfa_
      26. 980951Domain d1yg8z_: 1yg8 Z: [123139]
        automated match to d1tyfa_
    3. Domains for 2fzs:
      1. 980912Domain d2fzsa_: 2fzs A: [134462]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      2. 980913Domain d2fzsb_: 2fzs B: [134463]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      3. 980914Domain d2fzsc_: 2fzs C: [134464]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      4. 980915Domain d2fzsd_: 2fzs D: [134465]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      5. 980916Domain d2fzse_: 2fzs E: [134466]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      6. 980917Domain d2fzsf_: 2fzs F: [134467]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      7. 980918Domain d2fzsg_: 2fzs G: [134468]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      8. 980919Domain d2fzsh_: 2fzs H: [134469]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      9. 980920Domain d2fzsi_: 2fzs I: [134470]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      10. 980921Domain d2fzsj_: 2fzs J: [134471]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      11. 980922Domain d2fzsk_: 2fzs K: [134472]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      12. 980923Domain d2fzsl_: 2fzs L: [134473]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      13. 980924Domain d2fzsm_: 2fzs M: [134474]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
      14. 980925Domain d2fzsn_: 2fzs N: [134475]
        automated match to d1tyfa_
        complexed with cmq, gol, pge
  4. 980952Francisella tularensis [TaxId:177416] [189492] (1 PDB entry)
  5. 980960Staphylococcus aureus [TaxId:93061] [189958] (1 PDB entry)

More info for Protein automated matches from c.14.1.1: Clp protease, ClpP subunit

Timeline for Protein automated matches from c.14.1.1: Clp protease, ClpP subunit: