Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097504Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. 2097583Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families) (S)
    in the different families beta-barrels are similarly distorted but may vary in the number of strands
  5. 2097655Family c.6.2.3: NodB-like polysaccharide deacetylase [89559] (7 protein domains)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=6, S=8; strand order 123456
  6. 2097676Protein automated matches [190086] (3 species)
    not a true protein

Species:

  1. 2097677Bacillus subtilis [TaxId:1423] [186808] (3 PDB entries)
    1. Domains for 1w17:
      1. 2097678Domain d1w17a_: 1w17 A: [120573]
        automated match to d1w1b1_
      2. 2097679Domain d1w17b_: 1w17 B: [120574]
        automated match to d1w1b1_
    2. Domains for 1w1a:
      1. 2097682Domain d1w1a1_: 1w1a 1: [120575]
        automated match to d1ny1a_
        complexed with cd, gol, ndg
      2. 2097683Domain d1w1a2_: 1w1a 2: [120576]
        automated match to d1ny1a_
        complexed with cd, gol, ndg
    3. Domains for 1w1b:
      1. 2097680Domain d1w1b1_: 1w1b 1: [120577]
        automated match to d1ny1a_
        complexed with cd
      2. 2097681Domain d1w1b2_: 1w1b 2: [120578]
        automated match to d1ny1a_
        complexed with cd
  2. 2097684Clostridium thermocellum [TaxId:1515] [187519] (1 PDB entry)
  3. 2097686Streptomyces lividans [TaxId:1916] [187533] (1 PDB entry)

More info for Protein automated matches from c.6.2.3: NodB-like polysaccharide deacetylase

Timeline for Protein automated matches from c.6.2.3: NodB-like polysaccharide deacetylase: