Species:

1. Escherichia coli K-12 [TaxId:83333] [189116] (6 PDB entries)

   1. Domains for 3gib:

      1. Domain d3giba_: 3gib A: [176667] automated match to d1hk9d_ protein/DNA complex; protein/RNA complex; complexed with nhe

      2. Domain d3gibb_: 3gib B: [176668] automated match to d1hk9d_ protein/DNA complex; protein/RNA complex; complexed with nhe

      3. Domain d3gibc_: 3gib C: [176669] automated match to d1hk9d_ protein/DNA complex; protein/RNA complex; complexed with nhe

   2. Domains for 3qhs:

      1. Domain d3qhsa_: 3qhs A: [248886] automated match to d3inzf_

      2. Domain d3qhsb_: 3qhs B: [248887] automated match to d3inzf_

      3. Domain d3qhsc_: 3qhs C: [248888] automated match to d3inzf_

      4. Domain d3qhsd_: 3qhs D: [248889] automated match to d3inzf_

      5. Domain d3qhse_: 3qhs E: [248890] automated match to d3inzf_

      6. Domain d3qhsf_: 3qhs F: [248891] automated match to d3inzf_

      7. Domain d3qhsg_: 3qhs G: [248892] automated match to d3inzf_

      8. Domain d3qhsh_: 3qhs H: [248893] automated match to d3inzf_

      9. Domain d3qhsi_: 3qhs I: [248894] automated match to d3inzf_

      10. Domain d3qhsj_: 3qhs J: [248895] automated match to d3inzf_

      11. Domain d3qhsk_: 3qhs K: [248896] automated match to d3inzf_

      12. Domain d3qhsl_: 3qhs L: [248897] automated match to d3inzf_

   3. Domains for 3vu3:

      1. Domain d3vu3c_: 3vu3 C: [239892] Other proteins in same PDB: d3vu3a1, d3vu3a2 automated match to d3inzf_ protein/RNA complex; complexed with hem

      2. Domain d3vu3d_: 3vu3 D: [239893] Other proteins in same PDB: d3vu3a1, d3vu3a2 automated match to d3inzf_ protein/RNA complex; complexed with hem

      3. Domain d3vu3e_: 3vu3 E: [239894] Other proteins in same PDB: d3vu3a1, d3vu3a2 automated match to d3inzf_ protein/RNA complex; complexed with hem

      4. Domain d3vu3f_: 3vu3 F: [239895] Other proteins in same PDB: d3vu3a1, d3vu3a2 automated match to d3inzf_ protein/RNA complex; complexed with hem

      5. Domain d3vu3g_: 3vu3 G: [239896] Other proteins in same PDB: d3vu3a1, d3vu3a2 automated match to d3inzf_ protein/RNA complex; complexed with hem

      6. Domain d3vu3h_: 3vu3 H: [239897] Other proteins in same PDB: d3vu3a1, d3vu3a2 automated match to d3inzf_ protein/RNA complex; complexed with hem

   4. Domains for 4jri:

      1. Domain d4jria_: 4jri A: [229637] automated match to d3quic_ mutant

      2. Domain d4jrib_: 4jri B: [235035] automated match to d4jrid_ mutant

      3. Domain d4jric_: 4jri C: [235036] automated match to d4jrid_ mutant

      4. Domain d4jrid_: 4jri D: [229638] automated match to d3quic_ mutant

   5. Domains for 4jrk:

      1. Domain d4jrka_: 4jrk A: [229633] automated match to d3quic_ mutant

      2. Domain d4jrkb_: 4jrk B: [229632] automated match to d3quic_ mutant

      3. Domain d4jrkc_: 4jrk C: [229635] automated match to d3quic_ mutant

   6. Domains for 4juv:

      1. Domain d4juva_: 4juv A: [235045] automated match to d4juvb_ mutant

      2. Domain d4juvb_: 4juv B: [229634] automated match to d3quic_ mutant

      3. Domain d4juvc_: 4juv C: [229636] automated match to d3quic_ mutant

      4. Domain d4juvd_: 4juv D: [235047] automated match to d4juvb_ mutant

      5. Domain d4juve_: 4juv E: [235046] automated match to d4juvb_ mutant

      6. Domain d4juvf_: 4juv F: [235048] automated match to d4juvb_ mutant

2. Escherichia coli [TaxId:511693] [189765] (3 PDB entries)

   1. Domains for 3qo3:

      1. Domain d3qo3a_: 3qo3 A: [215323] automated match to d3rerb_ protein/RNA complex; complexed with atp

      2. Domain d3qo3b_: 3qo3 B: [215324] automated match to d3rerb_ protein/RNA complex; complexed with atp

      3. Domain d3qo3c_: 3qo3 C: [215325] automated match to d3rerb_ protein/RNA complex; complexed with atp

      4. Domain d3qo3d_: 3qo3 D: [215326] automated match to d3rerb_ protein/RNA complex; complexed with atp

      5. Domain d3qo3e_: 3qo3 E: [215327] automated match to d3rerb_ protein/RNA complex; complexed with atp

      6. Domain d3qo3f_: 3qo3 F: [215328] automated match to d3rerb_ protein/RNA complex; complexed with atp

   2. Domains for 3rer:

      1. Domain d3rera_: 3rer A: [184909] automated match to d1hk9e_ protein/RNA complex; complexed with adp, mg

      2. Domain d3rerb_: 3rer B: [184910] automated match to d1hk9e_ protein/RNA complex; complexed with adp, mg

      3. Domain d3rerc_: 3rer C: [184911] automated match to d1hk9e_ protein/RNA complex; complexed with adp, mg

      4. Domain d3rerd_: 3rer D: [184912] automated match to d1hk9e_ protein/RNA complex; complexed with adp, mg

      5. Domain d3rere_: 3rer E: [184913] automated match to d1hk9e_ protein/RNA complex; complexed with adp, mg

      6. Domain d3rerf_: 3rer F: [184914] automated match to d1hk9e_ protein/RNA complex; complexed with adp, mg

   3. Domains for 3res:

      1. Domain d3resa_: 3res A: [184915] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      2. Domain d3resb_: 3res B: [184916] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      3. Domain d3resc_: 3res C: [184917] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      4. Domain d3resd_: 3res D: [184918] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      5. Domain d3rese_: 3res E: [184919] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      6. Domain d3resf_: 3res F: [184920] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      7. Domain d3resg_: 3res G: [184921] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      8. Domain d3resh_: 3res H: [184922] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      9. Domain d3resi_: 3res I: [184923] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      10. Domain d3resj_: 3res J: [184924] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      11. Domain d3resk_: 3res K: [184925] automated match to d1hk9e_ protein/RNA complex; complexed with adp

      12. Domain d3resl_: 3res L: [184926] automated match to d1hk9e_ protein/RNA complex; complexed with adp

3. Escherichia coli [TaxId:562] [189813] (4 PDB entries)

   1. Domain for 2y90:

      • Domain d2y90a_: 2y90 A: [244710] automated match to d3inzf_

   2. Domains for 2yht:

      1. Domain d2yhta_: 2yht A: [170791] automated match to d1hk9e_

      2. Domain d2yhtb_: 2yht B: [170792] automated match to d1hk9e_

      3. Domain d2yhtc_: 2yht C: [170793] automated match to d1hk9e_

      4. Domain d2yhtd_: 2yht D: [170794] automated match to d1hk9e_

      5. Domain d2yhte_: 2yht E: [170795] automated match to d1hk9e_

      6. Domain d2yhtf_: 2yht F: [170796] automated match to d1hk9e_

      7. Domain d2yhtg_: 2yht G: [170797] automated match to d1hk9e_

      8. Domain d2yhth_: 2yht H: [170798] automated match to d1hk9e_

      9. Domain d2yhti_: 2yht I: [170799] automated match to d1hk9e_

      10. Domain d2yhtj_: 2yht J: [170800] automated match to d1hk9e_

      11. Domain d2yhtk_: 2yht K: [170801] automated match to d1hk9e_

      12. Domain d2yhtl_: 2yht L: [170802] automated match to d1hk9e_

   3. Domains for 4jli:

      1. Domain d4jlia_: 4jli A: [229627] automated match to d3quic_ mutant

      2. Domain d4jlib_: 4jli B: [229628] automated match to d3quic_ mutant

   4. Domain for 4pno:

      • Domain d4pnoa_: 4pno A: [261123] automated match to d3qhsc_ protein/RNA complex; complexed with u5p

4. Escherichia coli [TaxId:585035] [340892] (1 PDB entry)

   • Domain for 6bdg:

     • Domain d6bdga_: 6bdg A: [340893] automated match to d4rcca_

5. Escherichia coli [TaxId:83333] [276985] (2 PDB entries)

   1. Domain for 4rcb:

      • Domain d4rcba_: 4rcb A: [276986] automated match to d3qhsb_

   2. Domain for 4rcc:

      • Domain d4rcca_: 4rcc A: [276987] automated match to d3qhsb_

6. Herbaspirillum seropedicae [TaxId:757424] [189857] (1 PDB entry)

   • Domains for 3sb2:

     1. Domain d3sb2a_: 3sb2 A: [185328] automated match to d1hk9d_ complexed with gol

     2. Domain d3sb2b_: 3sb2 B: [185329] automated match to d1hk9d_ complexed with gol

     3. Domain d3sb2c_: 3sb2 C: [185330] automated match to d1hk9d_ complexed with gol

     4. Domain d3sb2d_: 3sb2 D: [185331] automated match to d1hk9d_ complexed with gol

     5. Domain d3sb2e_: 3sb2 E: [185332] automated match to d1hk9d_ complexed with gol

     6. Domain d3sb2f_: 3sb2 F: [185333] automated match to d1hk9d_ complexed with gol

7. Pseudomonas aeruginosa [TaxId:381754] [314866] (1 PDB entry)

   • Domains for 5i21:

     1. Domain d5i21a_: 5i21 A: [315051] automated match to d3quia_ complexed with cl

     2. Domain d5i21b_: 5i21 B: [315062] automated match to d3quia_ complexed with cl

     3. Domain d5i21c_: 5i21 C: [314867] automated match to d3quia_ complexed with cl

8. Salmonella enterica [TaxId:99287] [189703] (2 PDB entries)

   1. Domains for 2ylb:

      1. Domain d2ylba_: 2ylb A: [170846] automated match to d1hk9e_

      2. Domain d2ylbb_: 2ylb B: [170847] automated match to d1hk9e_

      3. Domain d2ylbc_: 2ylb C: [170848] automated match to d1hk9e_

      4. Domain d2ylbd_: 2ylb D: [170849] automated match to d1hk9e_

      5. Domain d2ylbe_: 2ylb E: [170850] automated match to d1hk9e_

      6. Domain d2ylbf_: 2ylb F: [170851] automated match to d1hk9e_

   2. Domain for 2ylc:

      • Domain d2ylca_: 2ylc A: [170852] automated match to d1hk9e_ protein/RNA complex; complexed with scn, u

More info for Protein automated matches from b.38.1.2: Pleiotropic translational regulator Hfq

Timeline for Protein automated matches from b.38.1.2: Pleiotropic translational regulator Hfq:

• Protein automated matches from b.38.1.2: Pleiotropic translational regulator Hfq first appeared in SCOPe 2.01
  
• Protein automated matches from b.38.1.2: Pleiotropic translational regulator Hfq appears in SCOPe 2.05
  
• Protein automated matches from b.38.1.2: Pleiotropic translational regulator Hfq appears in SCOPe 2.07
  
• Protein automated matches from b.38.1.2: Pleiotropic translational regulator Hfq appears in the current release, SCOPe 2.08