PDB entry 3gib

View 3gib on RCSB PDB site
Description: Crystal Stucture of the Complex of the E. coli Hfq with Poly(A)
Class: RNA binding protein/RNA
Keywords: RNA binding protein, Hfq-RNA complex, degradosome component, DNA-binding, RNA-binding, Stress response, RNA binding protein-RNA COMPLEX
Deposited on 2009-03-05, released 2009-11-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.225
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3giba_
  • Chain 'B':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3gibb_
  • Chain 'C':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3gibc_
  • Chain 'H':
    Compound: 5'-r(p*ap*ap*ap*ap*ap*ap*ap*ap*a)-3'
  • Heterogens: NHE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gibA (A:)
akgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaist
vvpsrpvs

    Sequence, based on observed residues (ATOM records): (download) 
    >3gibA (A:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpvs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gibB (B:)
akgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaist
vvpsrpvs

    Sequence, based on observed residues (ATOM records): (download) 
    >3gibB (B:)
gqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
psrpv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gibC (C:)
akgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaist
vvpsrpvs

    Sequence, based on observed residues (ATOM records): (download) 
    >3gibC (C:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rp

  • Chain 'H':
    No sequence available.