PDB entry 3qo3

View 3qo3 on RCSB PDB site
Description: Crystal structure of Escherichia coli Hfq, in complex with ATP
Class: RNA binding protein
Keywords: RNA binding protein, sm-like, pleiotropic regulator, RNA chaperone, ATP-binding
Deposited on 2011-02-09, released 2012-02-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-03-27, with a file datestamp of 2013-03-22.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.229
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qo3a_
  • Chain 'B':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qo3b_
  • Chain 'C':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qo3c_
  • Chain 'D':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qo3d_
  • Chain 'E':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qo3e_
  • Chain 'F':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qo3f_
  • Heterogens: ATP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qo3A (A:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps

    Sequence, based on observed residues (ATOM records): (download) 
    >3qo3A (A:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qo3B (B:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps

    Sequence, based on observed residues (ATOM records): (download) 
    >3qo3B (B:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qo3C (C:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps

    Sequence, based on observed residues (ATOM records): (download) 
    >3qo3C (C:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3qo3D (D:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps

    Sequence, based on observed residues (ATOM records): (download) 
    >3qo3D (D:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3qo3E (E:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps

    Sequence, based on observed residues (ATOM records): (download) 
    >3qo3E (E:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3qo3F (F:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvps

    Sequence, based on observed residues (ATOM records): (download) 
    >3qo3F (F:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
s