PDB entry 3qhs

View 3qhs on RCSB PDB site
Description: Crystal structure of full-length Hfq from Escherichia coli
Class: RNA binding protein
Keywords: RNA binding protein, sm-like, pleiotropic regulator
Deposited on 2011-01-26, released 2011-05-18
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-05-18, with a file datestamp of 2011-05-13.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: 0.209
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsa_
  • Chain 'B':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsb_
  • Chain 'C':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsc_
  • Chain 'D':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsd_
  • Chain 'E':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhse_
  • Chain 'F':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsf_
  • Chain 'G':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsg_
  • Chain 'H':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsh_
  • Chain 'I':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsi_
  • Chain 'J':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsj_
  • Chain 'K':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsk_
  • Chain 'L':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: b4172, hfq, JW4130
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3qhsl_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3qhsA (A:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsA (A:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3qhsB (B:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsB (B:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshhsn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3qhsC (C:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsC (C:)
gqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvv
psrpvshhsn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3qhsD (D:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsD (D:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshhs

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3qhsE (E:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsE (E:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshh

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3qhsF (F:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsF (F:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshhs

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3qhsG (G:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsG (G:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshh

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3qhsH (H:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsH (H:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpvshh

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >3qhsI (I:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsI (I:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshh

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >3qhsJ (J:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsJ (J:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpvshh

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >3qhsK (K:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsK (K:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpvshhsnn

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >3qhsL (L:)
makgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhais
tvvpsrpvshhsnnagggtssnyhhgssaqntsaqqdseete

    Sequence, based on observed residues (ATOM records): (download) 
    >3qhsL (L:)
qslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvp
srpvshhs