Lineage for d1b8ia_ (1b8i A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1981147Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1981148Superfamily a.4.1: Homeodomain-like [46689] (20 families) (S)
    consists only of helices
  5. 1981149Family a.4.1.1: Homeodomain [46690] (41 protein domains)
    Pfam PF00046
  6. 1981319Protein Ultrabithorax (ubx) homeodomain [46718] (1 species)
  7. 1981320Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [46719] (1 PDB entry)
  8. 1981321Domain d1b8ia_: 1b8i A: [16010]
    Other proteins in same PDB: d1b8ib_
    protein/DNA complex

Details for d1b8ia_

PDB Entry: 1b8i (more details), 2.4 Å

PDB Description: structure of the homeotic ubx/exd/dna ternary complex
PDB Compounds: (A:) protein (ultrabithorax homeotic protein IV)

SCOPe Domain Sequences for d1b8ia_:

Sequence, based on SEQRES records: (download)

>d1b8ia_ a.4.1.1 (A:) Ultrabithorax (ubx) homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

Sequence, based on observed residues (ATOM records): (download)

>d1b8ia_ a.4.1.1 (A:) Ultrabithorax (ubx) homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

SCOPe Domain Coordinates for d1b8ia_:

Click to download the PDB-style file with coordinates for d1b8ia_.
(The format of our PDB-style files is described here.)

Timeline for d1b8ia_:

View in 3D
Domains from other chains:
(mouse over for more information)