SCOPe 2.08: Domain d2gycx1: 2gyc X:3-58

Lineage for d2gycx1 (2gyc X:3-58)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.59: Ribosomal protein L30p/L7e [55128] (1 superfamily)
   core: beta-alpha-beta-alpha-beta; antiparallel beta-sheet: order 312; some similarity to the ferredoxin-like fold

4. Superfamily d.59.1: Ribosomal protein L30p/L7e [55129] (1 family)

5. Family d.59.1.1: Ribosomal protein L30p/L7e [55130] (2 proteins)

6. Protein Prokaryotic ribosomal protein L30 [55131] (3 species)
   short-chain member of the family

7. Species Escherichia coli [TaxId:562] [160395] (29 PDB entries)
   Uniprot P02430 1-58

8. Domain d2gycx1: 2gyc X:3-58 [145275]
   Other proteins in same PDB: d2gyc11, d2gyc31, d2gyc32, d2gyc51, d2gyc52, d2gycb1, d2gycc1, d2gycd1, d2gycf1, d2gycf2, d2gycg1, d2gycg2, d2gych1, d2gyci1, d2gycj1, d2gyck1, d2gycm1, d2gycn1, d2gyco1, d2gycq1, d2gycs1, d2gyct1, d2gycu1, d2gycw1
   protein/RNA complex
   protein/RNA complex

Details for d2gycx1

PDB Entry: 2gyc, 15 Å

PDB Description: Structure of the 50S subunit of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143

PDB Compounds: (X:) 50S ribosomal protein L30

SCOPe Domain Sequences for d2gycx1:

Sequence; same for both SEQRES and ATOM records:

>d2gycx1 d.59.1.1 (X:3-58) Prokaryotic ribosomal protein L30 {Escherichia coli [TaxId: 562]}
tikitqtrsaigrlpkhkatllglglrrightveredtpairgminavsfmvkvee

Timeline for d2gycx1:

• d2gycx1 first appeared in SCOP 1.75
  
• d2gycx1 appears in SCOPe 2.07