Lineage for Species: Pyrococcus horikoshii [TaxId: 53953]

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2696503Fold a.7: Spectrin repeat-like [46965] (16 superfamilies)
    3 helices; bundle, closed, left-handed twist; up-and-down
  4. 2696852Superfamily a.7.12: PhoU-like [109755] (2 families) (S)
    duplication: consists of two sequence each repeats adopting this fold
  5. 2696853Family a.7.12.1: PhoU-like [109756] (3 proteins)
    Pfam PF01895
    this is a repeat family; one repeat unit is 1vct A:9-107 found in domain
  6. 2696854Protein Hypothetical protein PH0236, N-terminal domain [140350] (1 species)
    form dimers of dimers, similar to PhoU subunits and dimers, respectively
  7. 2696855Species Pyrococcus horikoshii [TaxId:53953] [140351] (4 PDB entries)
    Uniprot O57975 9-107

PDB entries in Species: Pyrococcus horikoshii [TaxId: 53953]:

  1. Domain(s) for 1vct:
    • 2696856Domain d1vcta1: 1vct A:9-107 [119986]
      Other proteins in same PDB: d1vcta2
      complexed with cl, edo, na
      applies to all domains of a family if the common domain is composed of a different number of small repeating units
  2. Domain(s) for 2bkn:
    • 2696859Domain d2bkna1: 2bkn A:11-107 [128700]
      Other proteins in same PDB: d2bkna2
      automated match to d1vcta1
      complexed with cs
      applies to all domains of a family if the common domain is composed of a different number of small repeating units
  3. Domain(s) for 2bko:
    • 2696857Domain d2bkoa1: 2bko A:9-107 [128702]
      Other proteins in same PDB: d2bkoa2
      automated match to d1vcta1
      complexed with ca, cl
      applies to all domains of a family if the common domain is composed of a different number of small repeating units
  4. Domain(s) for 2bkp:
    • 2696858Domain d2bkpa1: 2bkp A:9-107 [128704]
      Other proteins in same PDB: d2bkpa2
      automated match to d1vcta1
      complexed with k
      applies to all domains of a family if the common domain is composed of a different number of small repeating units

More info for Species Pyrococcus horikoshii [TaxId:53953] from a.7.12.1 Hypothetical protein PH0236, N-terminal domain

Timeline for Species Pyrococcus horikoshii [TaxId:53953] from a.7.12.1 Hypothetical protein PH0236, N-terminal domain: