SCOPe 2.08: Domain d2bkub1: 2bku B:1-861

Lineage for d2bkub1 (2bku B:1-861)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.1: ARM repeat [48371] (28 families)

5. Family a.118.1.1: Armadillo repeat [48372] (7 proteins)
   this is a repeat family; one repeat unit is 1ee4 A:288-330 found in domain

6. Protein Importin beta [48378] (3 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [140814] (1 PDB entry)
   Uniprot Q06142 1-861

8. Domain d2bkub1: 2bku B:1-861 [128712]
   Other proteins in same PDB: d2bkua_, d2bkuc_, d2bkud_
   complexed with gtp, mg
   applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d2bkub1

PDB Entry: 2bku, 2.7 Å

PDB Description: kap95p:rangtp complex

PDB Compounds: (B:) importin beta-1 subunit

SCOPe Domain Sequences for d2bkub1:

Sequence, based on SEQRES records:

>d2bkub1 a.118.1.1 (B:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mstaefaqllensilspdqnirltsetqlkklsndnflqfaglssqvlidentklegril
aaltlknelvskdsvktqqfaqrwitqvspeaknqiktnaltalvsieprianaaaqlia
aiadielphgawpelmkimvdntgaeqpenvkrasllalgymcesadpqsqalvsssnni
liaivqgaqstetskavrlaalnaladslifiknnmeregernylmqvvceatqaediev
qaaafgclckimskyytfmkpymeqalyaltiatmkspndkvasmtvefwsticeeeidi
ayelaqfpqsplqsynfalssikdvvpnllnlltrqnedpedddwnvsmsagaclqlfaq
ncgnhilepvlefveqnitadnwrnreaavmafgsimdgpdkvqrtyyvhqalpsilnlm
ndqslqvkettawcigriadsvaesidpqqhlpgvvqacliglqdhpkvatncswtiinl
veqlaeatpspiynfypalvdgligaanridnefnarasafsalttmveyatdtvaetsa
sistfvmdklgqtmsvdenqltledaqslqelqsniltvlaavirkspssvepvadmlmg
lffrllekkdsafieddvfyaisalaaslgkgfekyletfspyllkalnqvdspvsitav
gfiadisnsleedfrrysdammnvlaqmisnpnarrelkpavlsvfgdiasnigadfipy
lndimalcvaaqntkpengtlealdyqikvleavldayvgivaglhdkpealfpyvgtif
qfiaqvaedpqlysedatsraavgligdiaamfpdgsikqfygqdwvidyikrtrsgqlf
sqatkdtarwareqqkrqlsl

Sequence, based on observed residues (ATOM records):

>d2bkub1 a.118.1.1 (B:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
mstaefaqllensilspdqnirltsetqlkklsndnflqfaglssqvlidentklegril
aaltlknelvskdsvktqqfaqrwitqvspeaknqiktnaltalvsieprianaaaqlia
aiadielphgawpelmkimvdntgaeqpenvkrasllalgymcesadalvsssnniliai
vqgaqstetskavrlaalnaladslifiknnmeregernylmqvvceatqaedievqaaa
fgclckimskyytfmkpymeqalyaltiatmkspndkvasmtvefwsticeeeidiayel
aqfpqsplqsynfalssikdvvpnllnlltrqnedpedddwnvsmsagaclqlfaqncgn
hilepvlefveqnitadnwrnreaavmafgsimdgpdkvqrtyyvhqalpsilnlmndqs
lqvkettawcigriadsvaesidpqqhlpgvvqacliglqdhpkvatncswtiinlveql
aeatpspiynfypalvdgligaanridnefnarasafsalttmveyatdtvaetsasist
fvmdklgqtmsvdenqltledaqslqelqsniltvlaavirkspssvepvadmlmglffr
llekkdsafieddvfyaisalaaslgkgfekyletfspyllkalnqvdspvsitavgfia
disnsleedfrrysdammnvlaqmisnpnarrelkpavlsvfgdiasnigadfipylndi
malcvaaqntkpengtlealdyqikvleavldayvgivaglhdkpealfpyvgtifqfia
qvaedpqlysedatsraavgligdiaamfpdgsikqfygqdwvidyikrtrsgqlfsqat
kdtarwareqqkrqlsl

Timeline for d2bkub1:

• d2bkub1 first appeared in SCOP 1.73
  
• d2bkub1 appears in SCOPe 2.07